Gene Caci_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0226 
Symbol 
ID8331552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp249492 
End bp250529 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID644953392 
Producthypothetical protein 
Protein accessionYP_003111020 
Protein GI256389456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0353537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTC AGAAAACAGG CGTCCCGCCG GGCGAGTTCG ACATCTTCCT CTCCCTCGGC 
GGCCCCGACC GGGTCGAGGC GAACCTGCTC AAGGAGGCGC TGGTCAAGGA AGGGCTGACC
GTCTTCATCG ACGAGGACGA CATCAGGCAC TTCGACGGCA TCACCCGGGA GATAGAACGG
TGCCTGCGAT CCTCCCGGGC GCTACTCGCC TACTACTCCA GAGAGTATCC GCTGCGCTCC
GCGTGCCAGT TCGAGCTGAC CGCGGCTCTG TTGGCGGGAC GGAACGAGCA GGACCCGACG
CGGCGGATCA TCGTCGTCAA CCCCGAGGCG ACCGAGGATC ATATCCAGCC CGCCTACATC
AGCGACGCGC GGTTCGCGGT GCGCCCCGGC AGCGACCACG AGCGGAAGGC TCTGGCGGCG
CTGATCAAGC AGAAGGTGGA CACGCTCGAA GGACCGCTCA GCTCGATCGC CTTCACCCGA
CGGCCGCGCT GGTTCGCCTT CCGGATCGCC GGCGCGCCGG GCTTCGTGGG CCGGTACCGC
GAGTTGTGGG AGCTGGACAG TCTACTGACC AAGGCCGCAC TGCCGCTCAC CCAGGACACG
CCGTTCGGGC CGGTCGCGGT GGTCACGGGA GCCGCGCGGG TCGGCAAGAG CAGCCTGGTG
GCGGACTATG CGTGGCAGTT CGGCGCGGCT TTCCGCGGCG GTGTCTATTG GATCGACATG
TCCGGCGTCG AGGGGACCGC GGACCAGGTG CTTGCCGCCT ACGCTGACCG AGTCCGCTCG
AGCGCCGCAA TCGCGGGCCT CGATGTCGCC GGGCTCAGTC GGGAGCGGAT GTTCGGCGTG
CTCGGCGATC ATCTCGCCGC TACTGCGGAG CCCAGCTTGT GGATTGTCGA CGGCCTGCCC
GCGGGACTGG GCGAACAGGC TCCGCACCGT ATGATCATCC CGGCTGGCGA TCGGGTGCAG
ACCGTCTTCG TCGGGCGGCG CGACCCGTTC GGTGGGGCGA TCCGCGCGAT GGTGCTCGGC
GGCTTGAGCC GGGGATGA
 
Protein sequence
MSPQKTGVPP GEFDIFLSLG GPDRVEANLL KEALVKEGLT VFIDEDDIRH FDGITREIER 
CLRSSRALLA YYSREYPLRS ACQFELTAAL LAGRNEQDPT RRIIVVNPEA TEDHIQPAYI
SDARFAVRPG SDHERKALAA LIKQKVDTLE GPLSSIAFTR RPRWFAFRIA GAPGFVGRYR
ELWELDSLLT KAALPLTQDT PFGPVAVVTG AARVGKSSLV ADYAWQFGAA FRGGVYWIDM
SGVEGTADQV LAAYADRVRS SAAIAGLDVA GLSRERMFGV LGDHLAATAE PSLWIVDGLP
AGLGEQAPHR MIIPAGDRVQ TVFVGRRDPF GGAIRAMVLG GLSRG