| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0225 |
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| Symbol | |
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| ID | 8331551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 247117 |
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| End bp | 249495 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953391 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003111019 |
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| Protein GI | 256389455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.312331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAT CCGCCGGAAC AGTTGGGGGA GACGTGGATG CGAATCGTGA AATAGCGGCG
CAGCTGAAGT CGTGGCGCGA GAGGCGGCAT CTCAGCCAGG CGAACCTGGC CGACCGGATC
AACGTCTCCC GCTCGCACTA CACCCGCCTT GAACGAGGCG AACGGCCGCT ACACCCGGTG
CTGGCCGACG CGCTCGACAA GGCTTTGGAC ACCGGCGGGC TGTTCCAGAA CTTGCGTGAG
GGATCGGCGG CCGACCCCTC ACAGCACCGA AGCTCCGACG CGGCGTCACC GGGCGAGTCG
TCCGATCGCG GGCCCTTCGT CCCGTTCCCG AACACCGTGC ACTTCACCGG CCGGGCCGAT
GAGGTCCAGG CCGTGTGCCA AACGCTGACC GGGCAGCTCG GCCATCCCCG CGCGGCGGGG
ATCTGCGTCA TCAGTGGCAT GCCGGGGATC GGCAAGACCG CGCTGGCTCG ATGCGTCGCG
CACCTGCTCG CTGACCGCTT CCCGGATGGC TGCCTGTGCC TGGACCTGCA GGGATTCGCC
CCCGGGGTGA CGCCGTTGAC CGACTTCGAT GCGCTCGGCC TGGTGCTGGC GATGCTGGGC
GTGCCCGATG AGCAGATCCC GGCGGGACGG CAGGCGCGCG TCGTCCGCTA TCACCGGGAG
ATCGCCGGAC GGCGGCTGCT GCTCCTGCTC GATGACGCCG TGTGCGCTCA GCAGATCAGC
TGCCTGATGC CGCCGACAGC CGGTTGCTCG GTCCTGGTCA CCAGCCGCAA CCGGCTGACT
GCTCTCGACG ACGCGCACCG GGTGGTACTG CCTGTGCTGC CACCGGAGCA GGCAGCTGAG
TTGTTCTGCG CCGTTGCCGA GTATCGCGGC GGCGATCAGA CCTCGATCGA CGGCATTCTG
GCAGCGTGCG GCGGGGTTCC GCTCGCGCTG CGGATCGTGG CCGCCCGGTG TCGTCCCGAC
AGCGGTCTGA CACCGGCGGA CCTGGCGGCG CGGTTGGCGC ATCCCCGGTC GCGGCTCACC
CATCTCGCCG ACAATGAGCG GGCTGTCTCC GATGCCTTCG GCGCCTCACT GGACCTGCTT
CCTTCCGCAC AGCGCCGGCT GTTCTTGCTG CTCGGCCTGC ATCCGGCGAA ACCGCTGAGC
GGCTGGGCGG CCGCCGCGCT CGCCGACATT CCCGCCGAAC AAGCCGAGCG CGGGCTGGAG
GAACTGGTCG GAGCCAGCCT GCTGGAGCCT CGTGGGCACG GCCGCTTCCG AGTCCACGAC
CTGCTAGCGG AGTTCGCGGC TTCGGCCGTC CGGCGGGAAC TCCCGGCGAC GGAGATTTGG
GCGGCGACGG GGCGGATGCT GGACGCGTAC GCGGTCACCG CCGAGGCGGC CGACCGGCTG
CTCACCCCCT ACCGCCACCG TCTTTCAGCG ACTGAGGGCG CCGCGACCGG ATCACCGCCG
CAGACCTTCG AAGACGACGA ACATGCGCGG AGTTGGCTTA CTGATCATCT CGATACCCTC
AGCGCGCTGT GCGTGCTCGC CGCCACCGAC GGCTGGGACG AGCGGTCGTG GCAGCTGGCC
TACTCCCTGC GCGGAGTCTT CTTCCTCGGC CGGCACTGGC GGTTGTGGCG TGCCACGCAC
GAGGCGGCGC TGCCCGCTGC GGTCCGGGCG GGAAACCGCA TCGGCACCGG CATGACCTTG
GCCAACCTCG GTTTCGTGCT GGGCGAGACG CACGACTTCG AGGCGGCCAT GACCCACTTG
GGTGCCGCTG TGGAGGTGTT CCGGGACATC GGCGACAGAC ACGGCGAGTT CACGGCGCAA
TCCCACTTGG CCTGGATCCA GCACTGCACC GGTGACTACC GGGAAGCCCT GGCCGGGCAG
ACGGCCGCGC TGGAGTTCCG GCAGGCCGTC GGGACGCCGC GAAATGTGGC GATCATCATG
CGCGACATGG CCGCGACCGA GCTCGCCCTG GGGAAGCACG GCGAAGCCCG CGACCACCTC
CAGACCGCGG TTGCGATGTT CACCGAGTTG GGACTGCGCC TGGATCTGAC GATGGCGCTC
AACGGCCTCG GCGAACTCGC CGTCCACGAG GGCGACACCC TCCAGGCCGA CGTCCACCAC
TATGCAGCGC TGAACGCCGC CCGGCGCTCG GGCAGCGTCT TCGAGCAGGC CCGTGCGCAC
GCTGGACTGG GGCGGTGCGC CGTCCGCCGA GGCCGCCCGG CGCGCGCGCG GCACCAGCTG
ACCAGAGCGC TGCGACTTTA CGACACATTG GGTGCCGGCC ATGTCGCGGC CGCCGTGCAC
GCCGAACTCG CCGCGTTGGA CGGTGCCGGG ATCTCCGCAG CGCGTACCCG CACGCCGGGC
ACGCCCAGTG CGCCGAGCGC TCCGGGACAG ACGCGATGA
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| Protein sequence | MCGSAGTVGG DVDANREIAA QLKSWRERRH LSQANLADRI NVSRSHYTRL ERGERPLHPV
LADALDKALD TGGLFQNLRE GSAADPSQHR SSDAASPGES SDRGPFVPFP NTVHFTGRAD
EVQAVCQTLT GQLGHPRAAG ICVISGMPGI GKTALARCVA HLLADRFPDG CLCLDLQGFA
PGVTPLTDFD ALGLVLAMLG VPDEQIPAGR QARVVRYHRE IAGRRLLLLL DDAVCAQQIS
CLMPPTAGCS VLVTSRNRLT ALDDAHRVVL PVLPPEQAAE LFCAVAEYRG GDQTSIDGIL
AACGGVPLAL RIVAARCRPD SGLTPADLAA RLAHPRSRLT HLADNERAVS DAFGASLDLL
PSAQRRLFLL LGLHPAKPLS GWAAAALADI PAEQAERGLE ELVGASLLEP RGHGRFRVHD
LLAEFAASAV RRELPATEIW AATGRMLDAY AVTAEAADRL LTPYRHRLSA TEGAATGSPP
QTFEDDEHAR SWLTDHLDTL SALCVLAATD GWDERSWQLA YSLRGVFFLG RHWRLWRATH
EAALPAAVRA GNRIGTGMTL ANLGFVLGET HDFEAAMTHL GAAVEVFRDI GDRHGEFTAQ
SHLAWIQHCT GDYREALAGQ TAALEFRQAV GTPRNVAIIM RDMAATELAL GKHGEARDHL
QTAVAMFTEL GLRLDLTMAL NGLGELAVHE GDTLQADVHH YAALNAARRS GSVFEQARAH
AGLGRCAVRR GRPARARHQL TRALRLYDTL GAGHVAAAVH AELAALDGAG ISAARTRTPG
TPSAPSAPGQ TR
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