| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0217 |
|---|
| Symbol | |
|---|
| ID | 8331543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 235340 |
|---|
| End bp | 237394 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953385 |
|---|
| Product | putative cell wall binding repeat 2-containing protein |
|---|
| Protein accession | YP_003111013 |
|---|
| Protein GI | 256389449 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2247] Putative cell wall-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.952991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCC CTGTGCTCTG TCTCGTCGTC AGCCTCAAGG ATGTCTCTGT GCCGAAGCCA
CGTGCCATAC GACTCGCGAC GCTCGCGATC ACCGGCGCCG CCCTGCTTGT CGCCGGGGCC
GCCCCGGCAC TGGCCGCCGG GCCCGGCGGC CGGTTCGGCG TCTCGGCGAG CGCCTCCTCC
GCTCCTGCGA TGTCCCTCTC GTTCGGGTTC TATGCCGGGA CGTCGCATGC GGCCGCGGTG
CTCTACGCGT TCAACGTCGA TCCGGCGAAG GAAGCGACCA CCACGTATCG GATCGACTGG
GGCGACGGAA GCACACCGTG GGTCCAGACC GGTGGGACGG TGCCGAACGG CCTGGTCATC
TCGCACGACT ACCCGCACGC CGGGGTCTGG AAGGCGACGG CGACGGTGGA CGACGGGACG
TCCACCGTCG GTCAGAACAC CACGTACACC GCGCACTATC CGACCACTCC CACCACGCCG
GGGTCCGCTT TCACACCTGT CGGCGGGAAC GCGCCGCTGG CCGGGGATCT GAGCATCGAC
GGCGGGACCG TCGACGCCGC CGCCACGAAG AGCTACATCG TGAACTGGGG CGACGGGTCG
CCGTCGCAGA CGGTCGCCGC GGCTGATTCC GGGCCCACCG TGGTGCACCA CGTGTTCACC
GCGCCGCGGT CCTATGGCGT GTCCGTGGTG ACCACCGACG GCATCGACTC CTCGGCGCCG
CCGCTGTATC CGACCGCTGT CAGCGCCTGG GGTCTGGCGT TCTCCAGCAC GGTGAACACC
ACCGCGTTCG CGACGGTGAC CGTCACCTCC TCCGCCGGCA AGAGCCTGCC GACGTACAGC
GACTACTACA TGTTCTCGGT CAACTGGGGC GACGGCACCA CCTCGCCGGC CACCCAGTCG
GAGGACATGA CGCACCAGTA CAAGACCGGC GGGCCCTACG CCGTCACGGT GACCATGGCG
CCGACCATGG ACGCGGACAA GTCGCCCGCC TACACCTGGA CCGCCGGCAC GACGCTGGTC
GTGCCCACGC CGCCGCCGCC CGCCCCGCCG GCCGTAGGCA CGCGCCTGGT GCAGCGCCTG
GGCGGTCTGG ACCGCATCGG CACCGGGATC ACCGTCTCCC GGAGCGGCTG GAGCAGCTGG
CAGAACAGAT TCCCCTACGG CGGTCAGCTC CCCGCCGGCG CCGTCGTGCT GGCCCGGTCC
GACGGGTTCT CCGACGCCCT GGCCGGCGTC CCGCTGGCCG CGCACGTCAA CGGCCCGCTG
CTGCTGACCG GCGGCAGCGC GCTGGACCTG ACCGTCGAGC ACGAGATCAC CAGGGTGCTG
CAACCCCATG CCGGCAAGAC CGTCTACCTG CTGGGCGGTA CCGCCGCGCT CTCCCCGGCG
GTCCAGCAGC GGCTCGTCCA GCTCGGCTAC ACGGTCCAGC GCTATTCCGG CCTCGACCGG
TTCGGCACGG CGCTGGACAT CGCGCGGCGC GGCCTGAACG ACCCGGCCAA GATCGTCGTC
GCGACCGGTA TGGACTATCC GGACGCGCTG GCTGCCGGAC CGTATGCGTC CTCGGTCCTG
GGGACGTCGG GTCACGAGGC GGCCGTCGTC CTGTCCCAGG GCGGCACCCT GGATCCCGCC
ACCGCGGGGT ACATCAGCTC CCGTCTGAAC TCCTCCAGCG CGCAGGCACC GACCGTCGTC
ACCGTGGGCG GCGCCGCCGG GCACGCGGTC GACGCGGCGT TCCCCGCCTT GGCCGGCCAC
GAACTCAAGC TGCAGGGTCA GAATCGCTAT CAGACCGCGA ACGCGGTCGC GTCGCAGTTC
ACTTCCGCCT CGCGCGTCGG CGTGGCGACG GGCACCGGCT ACGCGGACGC GCTGACCGGC
GGCGCCCTGG CCGCCGCCCG GCACTTCCCG ATCGTCCTCA CCACCCCGGC GGGCCTGGAC
CCGGCGGGAC GCGAGGCGAT CGCACGCTTC TGGTCGCAGC TGTCCGGCGC CTACCTGTTC
GGCGGCACGA CAGCGCTGAG CGACCAGGTC CTGCGGGACG TCGACGCGGT CGTCAACGCG
ACGGCGCAGC CGTGA
|
|---|
| Protein sequence | MSCPVLCLVV SLKDVSVPKP RAIRLATLAI TGAALLVAGA APALAAGPGG RFGVSASASS
APAMSLSFGF YAGTSHAAAV LYAFNVDPAK EATTTYRIDW GDGSTPWVQT GGTVPNGLVI
SHDYPHAGVW KATATVDDGT STVGQNTTYT AHYPTTPTTP GSAFTPVGGN APLAGDLSID
GGTVDAAATK SYIVNWGDGS PSQTVAAADS GPTVVHHVFT APRSYGVSVV TTDGIDSSAP
PLYPTAVSAW GLAFSSTVNT TAFATVTVTS SAGKSLPTYS DYYMFSVNWG DGTTSPATQS
EDMTHQYKTG GPYAVTVTMA PTMDADKSPA YTWTAGTTLV VPTPPPPAPP AVGTRLVQRL
GGLDRIGTGI TVSRSGWSSW QNRFPYGGQL PAGAVVLARS DGFSDALAGV PLAAHVNGPL
LLTGGSALDL TVEHEITRVL QPHAGKTVYL LGGTAALSPA VQQRLVQLGY TVQRYSGLDR
FGTALDIARR GLNDPAKIVV ATGMDYPDAL AAGPYASSVL GTSGHEAAVV LSQGGTLDPA
TAGYISSRLN SSSAQAPTVV TVGGAAGHAV DAAFPALAGH ELKLQGQNRY QTANAVASQF
TSASRVGVAT GTGYADALTG GALAAARHFP IVLTTPAGLD PAGREAIARF WSQLSGAYLF
GGTTALSDQV LRDVDAVVNA TAQP
|
|---|
| |