Gene Caci_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0211 
Symbol 
ID8331537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp228406 
End bp229176 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID644953379 
ProductABC transporter related 
Protein accessionYP_003111007 
Protein GI256389443 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG TGAGCGGTCC GGGCGGATCG GAGGGCCGCA AGCCGGTCAT CGAGCTCGCC 
GACATCCGCA AGACCTACGG CATGGACGGC ACCGCCGTCC ATGCCCTGCG CGGCGTCACC
CTGACCGTCC CGGCCGGGGA CTACGTCGCG ATCATGGGCG CCTCGGGCTC GGGCAAGTCC
ACGATGATGA ACATCATCGG CTGCCTGGAC GTCCCCACCT CCGGCCGCTA CCTGCTGGAC
GGCATCGAGG TCGAGCATCT GTCGGACCGC CAGCTCGCGC TGGTCCGCAA CCGCAAGATC
GGCTTCGTCT TCCAGTCCTT CAACCTGCTG CCGCGCACCA CCGCGCTGGA CAACGTGGAG
CTGCCGCTGA TCTACGCCGG CGTCGGCACC GCCGAGCGGC GCAAGCGGGC CAGGGCCGCC
CTGGAGCTGG TGGGTCTCGG CGACCGGATG AACCACAAGC CGCAGGAGCT CTCCGGCGGC
CAGCAGCAGC GCGTGGCCGT GGCCCGCGCA CTGGTCACCG CGCCGAGCCT GATCCTGGCC
GACGAGCCCA CCGGCAACCT GGACAGCGCC TCCTCCGAGG ACGTGATGGC CCTGTTCGAC
CGGCTGCACC AGGCCGGGCG CACCATCGTC CTGATCACCC ACGAGCACGA CATCGCCGAG
CACGCCGACC GCGCGATCCG GCTGATGGAC GGGCAGATCG TCTCCGATGA GCGCAACGGC
GCCCGCGGCT GGCTTTCCGC ACAGCACAGT GCCAAGCACG GGAGCGCTTG A
 
Protein sequence
MTGVSGPGGS EGRKPVIELA DIRKTYGMDG TAVHALRGVT LTVPAGDYVA IMGASGSGKS 
TMMNIIGCLD VPTSGRYLLD GIEVEHLSDR QLALVRNRKI GFVFQSFNLL PRTTALDNVE
LPLIYAGVGT AERRKRARAA LELVGLGDRM NHKPQELSGG QQQRVAVARA LVTAPSLILA
DEPTGNLDSA SSEDVMALFD RLHQAGRTIV LITHEHDIAE HADRAIRLMD GQIVSDERNG
ARGWLSAQHS AKHGSA