Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0211 |
Symbol | |
ID | 8331537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 228406 |
End bp | 229176 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953379 |
Product | ABC transporter related |
Protein accession | YP_003111007 |
Protein GI | 256389443 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGCG TGAGCGGTCC GGGCGGATCG GAGGGCCGCA AGCCGGTCAT CGAGCTCGCC GACATCCGCA AGACCTACGG CATGGACGGC ACCGCCGTCC ATGCCCTGCG CGGCGTCACC CTGACCGTCC CGGCCGGGGA CTACGTCGCG ATCATGGGCG CCTCGGGCTC GGGCAAGTCC ACGATGATGA ACATCATCGG CTGCCTGGAC GTCCCCACCT CCGGCCGCTA CCTGCTGGAC GGCATCGAGG TCGAGCATCT GTCGGACCGC CAGCTCGCGC TGGTCCGCAA CCGCAAGATC GGCTTCGTCT TCCAGTCCTT CAACCTGCTG CCGCGCACCA CCGCGCTGGA CAACGTGGAG CTGCCGCTGA TCTACGCCGG CGTCGGCACC GCCGAGCGGC GCAAGCGGGC CAGGGCCGCC CTGGAGCTGG TGGGTCTCGG CGACCGGATG AACCACAAGC CGCAGGAGCT CTCCGGCGGC CAGCAGCAGC GCGTGGCCGT GGCCCGCGCA CTGGTCACCG CGCCGAGCCT GATCCTGGCC GACGAGCCCA CCGGCAACCT GGACAGCGCC TCCTCCGAGG ACGTGATGGC CCTGTTCGAC CGGCTGCACC AGGCCGGGCG CACCATCGTC CTGATCACCC ACGAGCACGA CATCGCCGAG CACGCCGACC GCGCGATCCG GCTGATGGAC GGGCAGATCG TCTCCGATGA GCGCAACGGC GCCCGCGGCT GGCTTTCCGC ACAGCACAGT GCCAAGCACG GGAGCGCTTG A
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Protein sequence | MTGVSGPGGS EGRKPVIELA DIRKTYGMDG TAVHALRGVT LTVPAGDYVA IMGASGSGKS TMMNIIGCLD VPTSGRYLLD GIEVEHLSDR QLALVRNRKI GFVFQSFNLL PRTTALDNVE LPLIYAGVGT AERRKRARAA LELVGLGDRM NHKPQELSGG QQQRVAVARA LVTAPSLILA DEPTGNLDSA SSEDVMALFD RLHQAGRTIV LITHEHDIAE HADRAIRLMD GQIVSDERNG ARGWLSAQHS AKHGSA
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