Gene Caci_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0199 
Symbol 
ID8331525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp215132 
End bp216490 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content73% 
IMG OID644953367 
Producthistidine kinase 
Protein accessionYP_003110995 
Protein GI256389431 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA CTGTGGGAGC CAAGGCCGCC GCCCGGCGCG AGGGGGACAC CGCGCCGACG 
CTCGGCCCGG GCGAGCTGTT GAAGGGTCCC TTCACCGGCC GCGCCCTGCG CCAGCAGGGG
TACCTGCTGG TCTCGTTCGT CGCGGCGTTC GTGCAGGTCC TGGTGCTGAC GGTGACGCTG
GCCCTCGGCG GCGCGCTGGT CGTGCTGGTC GTCGGGCTGC CGCTGCTGCT GGCCGGGCTG
GTGAGCCTGC GCTGGAACAG CCGGCGCGAG CGGCTCCGGA TCCTGCGCCT GACCGGCGAG
CGGGTGCCCG AGCCCTACCG GGAGCCCGGG CCCTCCGGCA ACCCGCTGCA GCGGCTGCTG
GGCCACCTGT CCGACCCCGC GACCTGGCGG GACCTGGTGC ACCTGGTGGT GGCCTCGGGC
CTGGGACTCG GCTGGTTCCT CGTGGCGGTG GGCAGCTGGG TGCTGCCGCT CGGCGCGGTC
ACGCTGCCGT TCTGGTACAC CGCGCTGCCG GAGCACCGGA TCCCGCTGAT GCACGTGAAC
GGCAGCGAGT ACTACATCAG CACTCTGCCG TCCATCCTCG CCTTCTCCGC GGTCACGCTG
GCCTTCGTCT GGCTGGTCAA CCCGACCCTG CTGGAACTGG GGACCCGGAC CCAGACCGGT
CTGGGCCGCG CCCTGCTCGG GCTGAGCCGC CTGGAGCTGG ACCGCCGCGA GACGGCGCTG
CGCACCACCC GCAGCCAGGC CGTCAGCGCC GCCGAAGCCG AGCGCCGCCG GATCGAGCGC
GACCTGCACG ACGGCGCGCA GCAGCGGCTG GTCGCCCTGG CGATGGACCT GGGCCGGGCC
AAGTCGAAGC TGAAGACCGG CGACGAGGCC GATTCCGAGG CCGCCGCGCA GCTGGTCGCC
GAAGCGCACG AAGGCGTGAA GCTGGCCCTG AGCGAGCTGC GCGATCTGGC GCGCGGCATC
CACCCGGCGG TCCTGACCGA CCGCGGCCTG GACGCGGCGC TGTCCGCCCT GGCCGGCCGC
TCCCCGATCC CGGTGGAGGT GGACGCCGAC CTGCCCTGGC GCCCGAGCCC GGAAGTGGAG
TCGGCGGCGT ACTTCGTGGC CTCCGAGGCG CTGGCGAACA TGGCCAAGCA CGCCCACGCC
ACCCGCGCCT GGATCGAGCT GGAGATCCGC GAGGACCACC TGCGGATGAT CGTCGGCGAC
AACGGCGTCG GCGGTGCACA AACCGATCCC GGCGGCGGTC TCGATGGTCT GTCCGACCGC
ATCGCGCCAC TGGATGGCAT CCTGTCGGTC AGCAGCCCAC TCGGGGGACC GACCCAAATC
ATCATGGAGA TGCCATGCCC GAACCCATCC GCGTCCTGA
 
Protein sequence
MITTVGAKAA ARREGDTAPT LGPGELLKGP FTGRALRQQG YLLVSFVAAF VQVLVLTVTL 
ALGGALVVLV VGLPLLLAGL VSLRWNSRRE RLRILRLTGE RVPEPYREPG PSGNPLQRLL
GHLSDPATWR DLVHLVVASG LGLGWFLVAV GSWVLPLGAV TLPFWYTALP EHRIPLMHVN
GSEYYISTLP SILAFSAVTL AFVWLVNPTL LELGTRTQTG LGRALLGLSR LELDRRETAL
RTTRSQAVSA AEAERRRIER DLHDGAQQRL VALAMDLGRA KSKLKTGDEA DSEAAAQLVA
EAHEGVKLAL SELRDLARGI HPAVLTDRGL DAALSALAGR SPIPVEVDAD LPWRPSPEVE
SAAYFVASEA LANMAKHAHA TRAWIELEIR EDHLRMIVGD NGVGGAQTDP GGGLDGLSDR
IAPLDGILSV SSPLGGPTQI IMEMPCPNPS AS