Gene Caci_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0190 
Symbol 
ID8331516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp206576 
End bp207328 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID644953358 
Productlipoprotein 
Protein accessionYP_003110986 
Protein GI256389422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGG CCCGCTCGGT CCGTCTCGCC GCCGTCATCG TGCTCGGCGG GGCAGTAGCC 
CTGGCCACCT CCGCGTGCGG CGGCCCGATG CAGGCCGGGG CCGCGGCCGT GGTGCAGGGG
CAGCGGACCA CCGACGCCAC CGTCCAGGAC CAGGTCGCCT CGATCGTGTC CCTGGTGCAG
CACAACAACC TGCAGCAGGG CGACGTCACC GACGAGGAGC GCTCGGCGCT GGCCAAGGCG
CAGATCAACC TGCTGGTGCA GCAGGCGGTG TGGCAGAAGG TCGCCGACGA CAACGGCGTG
AAGGTCACCG CCGCCGACGA CGCCAAGGAG CACAGCGCCC TGGTCGAGCA GGCGCGCGGC
TCGCTGCAGG GCACGAAGTT CACCGGCAGC GACAACGAGG CCGTGGCGCT GGCCGACGCC
GAGTCCCAGC AGAACTCCTC GGGCCTGGCG CCCTCCAGCG TGCCGGTCTA CTCCCACATC
CAGGCGCTGG TCACCGCGGT GATCGACGAC CAGGCGACCA AGCTGCGCGT GGACCCCAAC
GACCAGAACA GCCTGCCGGC GCTGCAGGGC GCGATCCTGC CGATGCTGTC CAAGGCCTCC
ACCCAGATCG ACGTCAAGAT CTCGCCGCGC TACGGCAGCT TCGACGCCTC CACCCGCCAG
GTCGTCGCGG CGCAGACCTC GTGGATCCGG CCGACCAAGG CCCAGGTCGC CGCCGCGGCC
GCCGCGCAGG CGCAGCAGCA GCAGTCCCAG TGA
 
Protein sequence
MIQARSVRLA AVIVLGGAVA LATSACGGPM QAGAAAVVQG QRTTDATVQD QVASIVSLVQ 
HNNLQQGDVT DEERSALAKA QINLLVQQAV WQKVADDNGV KVTAADDAKE HSALVEQARG
SLQGTKFTGS DNEAVALADA ESQQNSSGLA PSSVPVYSHI QALVTAVIDD QATKLRVDPN
DQNSLPALQG AILPMLSKAS TQIDVKISPR YGSFDASTRQ VVAAQTSWIR PTKAQVAAAA
AAQAQQQQSQ