| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0186 |
|---|
| Symbol | |
|---|
| ID | 8331512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 199793 |
|---|
| End bp | 200272 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953354 |
|---|
| Product | alkylhydroperoxidase like protein, AhpD family |
|---|
| Protein accession | YP_003110982 |
|---|
| Protein GI | 256389418 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCC GTCTGAACAC CTTCGCCACC CCGACCGGCG CCAAGTTCGG CAAGTACCTG
ATCGCCGCGG GCCGCGTCCT GCGCGAGGCC GGCGTCCCGG TCGCGACCCT GCACCTGGTC
GAGATCCGCG CCAGCCAGAT CAACGGCTGC GGCTTCTGCC TGGACATGCA CACCAAGGAC
GCCACGGCCG CCGGCGAAAC AGCGGAGCGG CTGAACATGG TCGCCGCCTG GCGCGAGGCC
GCCTGCTACA CCGAAGCCGA GCGCGCCGCG CTGGAGCTGA CCGAGGCCGG CACCCGGCTG
GCCGACGGCA CCGGCGTCGC CGACGAGGTG TGGGACGCCG CCGCCAAGCA CTTCGACGAG
GACCAGCTCG CCACGCTGGT GGCGCAGATC GCGCTGATCA ACGCCTTCAA CCGCGGCAAC
GTCATGGTCA AGCAGCCGGC CGGGGACTAC GTGCCCGGCC AGTTCGACGA CGCCGAGTAA
|
|---|
| Protein sequence | MEARLNTFAT PTGAKFGKYL IAAGRVLREA GVPVATLHLV EIRASQINGC GFCLDMHTKD
ATAAGETAER LNMVAAWREA ACYTEAERAA LELTEAGTRL ADGTGVADEV WDAAAKHFDE
DQLATLVAQI ALINAFNRGN VMVKQPAGDY VPGQFDDAE
|
|---|
| |