| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0180 |
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| Symbol | |
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| ID | 8331506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 193634 |
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| End bp | 195694 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953348 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003110976 |
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| Protein GI | 256389412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG TGAATCGTCG CCGGTTCCTC CAGATCACCG GCGGCACCGC CGCCGCGACC
TCGATGCCCA TGCTCACCGC GAGCATCGCC CGCGCCGCCG CGGTGCGGCC CGCCCGCCGG
ACGGGAACCA TCAAAGACAT CGAGCACGTG GTGATCCTGA TGCAGGAGAA CCGCAGCTTC
GACCACTACT TCGGGACGCT GCGCGGGGTG CGCGGCTTCG GCGACCCGCG GCCGGCACGG
CTGCCGAACG GCAAGGCGGT CTGGCACCAG GCCGACGCCG CCGGAAACGA GATCCTGCCC
TGGCGCCCGA CCGGCGTCCC GGATTTGGGC CTGAAGTTCC TGGACGGTCT GGACCACAGC
TGGAACGGCG GCCACCACGC CTGGAACCAG GGGAACTACG ACCAGTGGGT CCCGGCCAAG
GGCCCGGGGA CGATGGCTCA CTTCGAGCGC CAGGACATCC CGTTCCACTT CGCGCTGGCC
GACGCCTTCA CAGTCTGCGA CGCCTATCAC TGCTCGCTGA TGACCTCGAC CGACCCGAAC
CGCTACTACC TGTGGACCGG CTTCACGGGC AACGACGGCA AGGCCGGCGG ACCGGTCCTG
GACAACGCCG AGGCCGGCTA CGACTGGACC ACCTACCCCG AGCGGCTGCA GGCCGCCGGC
GTCTCCTGGA AGATCTACCA GGACATCGGC ACCGGTCTGG ACGCGAAGGG CTCCTGGGGC
TGGACCGACG ACGCCTACAT CGGCAACTAC GGCGACACCT CGGTGCTGTA CTTCCACCAG
TATCAGAACG CGAAGCCCGG CGACCCGCTC TACGACAACG CGCGCACCGG CACCAACGCC
GCGGCCGGGC AGGGCTACTT CGACCTGCTG GCGCAGGACG TGAAGAACGG CAAGCTGCCG
CAGGTCTCCT GGATCACCGC GCCGGAGGCG TTCAGCGAGC ACCCGAACTG GCCGGTGAAC
TACGGCGCCT GGTACGTCTC GCAGGTCCTG GACATCCTGT CCTCGGACGA GGACCTGTGG
AGCAAGACCG CGCTGTTCAT CATGTACGAC GAGAACGACG GCTTCTTCGA CCACGTGGTC
CCGCCGTTCG TGCCGGGCGG CGCGGTCGGC GGCGCCTCCA CGGTCGACAC CTCCACCGAG
TACTACTCCG CCGGCGCCGG CTTCGATGCC GGGTCCTACG GCCTGGGCCT GCGCGTGCCG
ATGTTCGTGG TCTCGCCCTG GAGCAAGGGC GGCTGGGTGG ACTCCGAGAC CTTCGACCAC
ACCTCGGTGA TCCGCTTCCT GGAGAAGCGT TTCGGCGTGC ACGAGCCCAA CATCTCGCCG
TGGCGCCGTG CCGTCTGCGG CGACCTGACC AGCGCCTTCG ACTTCGGTCT GCGCGAGACC
GAGGTCCCGG CGCTGCCGAG CACCGCCTCC TACGTCCCGC CGGACCACGC ACGCCACTCC
AGCTACCCCG TGACCCTGCC GGCGAGCGCG TCGTTGCCGA AGCAGGAGGC CGGCCGGCGC
CCCGCCCGCG CGTTGCCGTA CGACCTGGCG GCGGACGGCC GGATCGCGGG CGGGGCGCTG
CGGATCGGCT TCGCCAGCCG TGGCAGCGCG GGCGCGAGCT TCGTGGTGAC CTCGATCCTG
GACAAGACCG GACCGTGGAG CTACACGGTC GGCGCGGGCC ACACCCTCGA CGGCTCGTGG
AAGCTGTCGG GCGCGTATGA CTACGACGTG CGCGGTGCCA ACGGCTTCCT GCGCGAGTTC
AAGGGCGACG CCGCCAAGGC CGGGCTCGAA GTCGTCGCCG AGCACGTCGG GAACAGCCAG
AACCTGAAGC TGACGCTGAC CAACACCGGC TCCGCCGACG TCACCGCGAC CGTCGTCGAC
TCCTACGGCT GCGACGGCAA GGCGGTCCTG CGGGTGCGGG CCGGCAAGCA CGCGACGCAC
GTCGTGCCGG CGGGCGCCTC CGACGGTTGG TACGACGCCA CGGTCACCTC CGACCACGAC
GCCGCGTACG TGCGGCGCTT CGCCGGCCAC ACCGAGAACG GCCGGCCGAG CGTGAGCGAC
CCGGCGATCA TCACGGGCTG A
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| Protein sequence | MTAVNRRRFL QITGGTAAAT SMPMLTASIA RAAAVRPARR TGTIKDIEHV VILMQENRSF
DHYFGTLRGV RGFGDPRPAR LPNGKAVWHQ ADAAGNEILP WRPTGVPDLG LKFLDGLDHS
WNGGHHAWNQ GNYDQWVPAK GPGTMAHFER QDIPFHFALA DAFTVCDAYH CSLMTSTDPN
RYYLWTGFTG NDGKAGGPVL DNAEAGYDWT TYPERLQAAG VSWKIYQDIG TGLDAKGSWG
WTDDAYIGNY GDTSVLYFHQ YQNAKPGDPL YDNARTGTNA AAGQGYFDLL AQDVKNGKLP
QVSWITAPEA FSEHPNWPVN YGAWYVSQVL DILSSDEDLW SKTALFIMYD ENDGFFDHVV
PPFVPGGAVG GASTVDTSTE YYSAGAGFDA GSYGLGLRVP MFVVSPWSKG GWVDSETFDH
TSVIRFLEKR FGVHEPNISP WRRAVCGDLT SAFDFGLRET EVPALPSTAS YVPPDHARHS
SYPVTLPASA SLPKQEAGRR PARALPYDLA ADGRIAGGAL RIGFASRGSA GASFVVTSIL
DKTGPWSYTV GAGHTLDGSW KLSGAYDYDV RGANGFLREF KGDAAKAGLE VVAEHVGNSQ
NLKLTLTNTG SADVTATVVD SYGCDGKAVL RVRAGKHATH VVPAGASDGW YDATVTSDHD
AAYVRRFAGH TENGRPSVSD PAIITG
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