Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0172 |
Symbol | |
ID | 8331498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 184839 |
End bp | 185807 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953340 |
Product | ABC transporter related |
Protein accession | YP_003110968 |
Protein GI | 256389404 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCGA TCGAGGTGCG CGGCCTGCGG AAGGCCTACG GCGACGTAAC CGCCGTGGAG GACGTCTCGT TCGAGGTCGC CGAAGGGGAG ATCTTCGGGA TCCTCGGGCC CAACGGCGCC GGGAAGACCA CGACCGTGGA GTGTGTCAGC GGTCTGCGGA CGCCCGACGC CGGCGAGGTC CGCGTGCTGG GTCTGGACCC GCGGCGCGAT CGTGAGGACG TCCGCCAGGT GCTCGGCGTG CAGCTGCAGG AGAGCCAGCT GCCGGGCAAG ATCCATGTGC GCGAGGCGCT GGAGCTGTAC GCGTCCTTTT ACCGGGACCC GGCCGACGTG GACCGGCTGC TGGCGCAGTG GGAGCTGACG GAGAAGGCCG GCGCCCGCTT CGGCAAGCTG TCCGGCGGCC AGAAGCAGCG GCTGGCCGTG GCGCTGGCGA TGGTCGGCAA GCCGCGGGTG GTCGTGCTGG ACGAGCTGAC CACCGGTCTG GACCCGCACG CGCGGCGCAC CGCCTGGGAG ATGGTCCAGG CCGTCCGGGA CTCCGGCGTC ACCGTCCTGC TGGTCACGCA CTTCATGGAA GAGGCCGAGC GGCTCTGCGA CCGGGTCGCG ATCATCGACG CCGGCCGCGT GGTCGCCCTG GACACCCCGG CCGCGATGGC CGCGCGGGGT CCGGCAGCCG GCCAGCGGAT GCGGTTCCGG CCCTCGGCGC CGGTCGAGGA CGCGGACCTG CTCGCGTTGC CCGAGGTCCG CAGCGTCGAG CGGCACGGCG CGCATCTGGA AGTGAGCGGG ACCTCGGAAG TCATCGGGGC GGTCACCGCG TACCTCGCGC GGCGCCAGAT CATCGCCGCC GAGCTGCGCG TCGAGCAGAG CAGCCTCGAC GACGCGTTCA TCGCGTTGAC GACGCACGCG ACCACCACGA CCCATGCCGC GCAGACCATG CAGACGGCGC AGACCGCGCA GACCGCCAAG GAGTCCTGA
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Protein sequence | MPAIEVRGLR KAYGDVTAVE DVSFEVAEGE IFGILGPNGA GKTTTVECVS GLRTPDAGEV RVLGLDPRRD REDVRQVLGV QLQESQLPGK IHVREALELY ASFYRDPADV DRLLAQWELT EKAGARFGKL SGGQKQRLAV ALAMVGKPRV VVLDELTTGL DPHARRTAWE MVQAVRDSGV TVLLVTHFME EAERLCDRVA IIDAGRVVAL DTPAAMAARG PAAGQRMRFR PSAPVEDADL LALPEVRSVE RHGAHLEVSG TSEVIGAVTA YLARRQIIAA ELRVEQSSLD DAFIALTTHA TTTTHAAQTM QTAQTAQTAK ES
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