| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0171 |
|---|
| Symbol | |
|---|
| ID | 8331497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 184044 |
|---|
| End bp | 184640 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953339 |
|---|
| Product | peptidyl-tRNA hydrolase |
|---|
| Protein accession | YP_003110967 |
|---|
| Protein GI | 256389403 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
|---|
| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCGAGGCCCG CGACCAGCTC TGGCTGATCG CGGGCCTCGG CAATCCCGGG
CCCGGGTACG CCGGCAACCG GCACAACGCC GGCTTCATGG TCGTGGACCT GCTCGCCGCG
CGCGTCGGCG GCAAGTTCAA GTCGCACAAG GCGCGGGCGG ACGTCGTGGA GGGCCGGCTC
GGGGTCGGCG GACCGCGCGT GGTCCTGGCC AAGCCGAAGA CCTTCATGAA CCTGTCCGGC
GGCCCGGTGA AGGCGCTGCG CGACTTCTAC AAGATCGAGC CGGCGCAGAT CATCGCCGTG
CACGACGAAC TCGACGTGGA CTACGGCGTG CTGCGCCTGA AGCTCGGCGG CGGCGACAAC
GGCCACAACG GGCTGCGCTC GATCACCTCC TCGCTGGGGA CCAAGGAATA CCACCGCGTG
CGCTTCGGTG TCGGACGGCC GCCGGGGCGG CAGGATCCGG CGGACTTCGT CCTGAAGGAC
TTCTCCTCGA CCGAGAAGAA GGACCTGGAC TACAACGTGG ACCGGGCCGC CGACGCGGTC
GAGGACCTGA TCCGCCGCGG GCTCGTCGAG GCGCAGAACA TCTACCACGC GGCCTGA
|
|---|
| Protein sequence | MTTTEARDQL WLIAGLGNPG PGYAGNRHNA GFMVVDLLAA RVGGKFKSHK ARADVVEGRL
GVGGPRVVLA KPKTFMNLSG GPVKALRDFY KIEPAQIIAV HDELDVDYGV LRLKLGGGDN
GHNGLRSITS SLGTKEYHRV RFGVGRPPGR QDPADFVLKD FSSTEKKDLD YNVDRAADAV
EDLIRRGLVE AQNIYHAA
|
|---|
| |