Gene Caci_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0168 
Symbol 
ID8331494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp180559 
End bp182085 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content74% 
IMG OID644953336 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_003110964 
Protein GI256389400 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AGCACGCGCC GACCGTCATC ATCCTGGCCG CCGGCGAGGG CAAGCGGATG 
AAATCCGCGA CGCCGAAGGT GCTGCACGAG CTGTGCGGGC GCACCATGCT CGGCCACGTG
GTGGCCGCGG CGCAGGACCT GGCGCCCAGC CGGCTCGCGG TGGTCGTGGG CAAGGGCCGG
GACCTGGTCG CGCCGCACGT CGCGGCGATC GCGCCGGAGG CCCGGATCGT CGTGCAGGAG
CCGCAGAACG GGACCGGGCA GGCCGCGCGG CTGGCGCTGG AGGCCCTGGT CGCCGAGGGC
GGCCCGGCCG AGGGCACGGT GCTGGTGCTG CTCGGCGACG GCGCCATGGT CACCGGCGGC
ACGCTGCGCC ACCTGATCGC CGTGCACGAA AGTTCCGGCA ACGCCGTCAC CGACCTGACC
GCGGTCGTGC CGGACCCGCG CGGCCTGGGC CGCATCCTGC GCGAGCCGGA CGGCACGGCC
GAGGGCCGGG TCCTGGGCAT CGTGGAGGAG AAGGACTGCA CGCCGGCGCA GGCCACCATC
CCCGAGATCA ACTCCGGCAT CTTCGCCTTC GACGGCAAGC TCCTGCGCGA CGCGCTCAGC
CGGCTCACCA CCGACAACGC GCAGGGCGAG GAGCTGCTCA CCGACGTGCT GGCGATCGCC
GTCGGCGACG GCCTGCCGGT CGGCGCCGTG GTCGCCGCGG ACTACCACGA GGTGCTGGCC
GCCAACGACC GCGCGCAGCT GGCCGACCTG CGGCGGCTGA TGAACCAGCG GATCACCCGC
CAGTGGATGC TCGAGGGCGT CACCATCGTG GACCCGGCGA CCACCTGGAT CGACGTGCAC
GCCACCTTGG AGCCGGACGC CACGATCCGT CCCAACACCC AGCTGGAGGG CGCGACCCGG
ATCGCCGCCG GGGCGGACGT CGGCCCGAAC TGCACGCTGA GGGACACCGT CGTCGGCGAG
CGCGCGCGGG TCACCAACGC CACCACCGAC GGCGCCGAGA TCGGCCCGGA GGCCAGCGTC
GGGCCGTACA CCTATCTGCG CCCGGGCACC AAGCTCGGCC GCAAGTCCAA GGCCGGCGGC
TTCGTGGAGA TGAAGAAGTC GACGATCGGC GAGGGCACGA AGGTCCCGCA CCTGGCCTAC
ATCGGCGACG CCACGATCGG CGCGGGCACC AACATCGGCG CCGGCGTCAT CACCGCCAAC
TACGACGGCT ACAACAAGTT CCCGACCCGC ATCGGCGACC ACGCCTTCGT CGGGACCAAC
ACCACCCTGA TCGCCCCGGC GGAGGTCGCC GACGGCGCGT ACATCGCCGC GGGGTCGGCG
GTGAACATGC CGGTGGGTCC CGGCGAACTG GCGGTGGCGC GCGGCCGGCA GCGCAACATC
GCCGGGTACG TCGCGCGCAA GCGCCCGGAC TCGGTGGCGG CGCAGGCCGC CGCGCGTGCC
GCCGAGCGCG CCGCGGCCGG CGGGCAGCCA GCCGTTGAGA CGAATCCCAC AGGCGGCGGC
CCTGGCGCGC AGGCGGACGC GGTCTGA
 
Protein sequence
MTDQHAPTVI ILAAGEGKRM KSATPKVLHE LCGRTMLGHV VAAAQDLAPS RLAVVVGKGR 
DLVAPHVAAI APEARIVVQE PQNGTGQAAR LALEALVAEG GPAEGTVLVL LGDGAMVTGG
TLRHLIAVHE SSGNAVTDLT AVVPDPRGLG RILREPDGTA EGRVLGIVEE KDCTPAQATI
PEINSGIFAF DGKLLRDALS RLTTDNAQGE ELLTDVLAIA VGDGLPVGAV VAADYHEVLA
ANDRAQLADL RRLMNQRITR QWMLEGVTIV DPATTWIDVH ATLEPDATIR PNTQLEGATR
IAAGADVGPN CTLRDTVVGE RARVTNATTD GAEIGPEASV GPYTYLRPGT KLGRKSKAGG
FVEMKKSTIG EGTKVPHLAY IGDATIGAGT NIGAGVITAN YDGYNKFPTR IGDHAFVGTN
TTLIAPAEVA DGAYIAAGSA VNMPVGPGEL AVARGRQRNI AGYVARKRPD SVAAQAAARA
AERAAAGGQP AVETNPTGGG PGAQADAV