Gene Caci_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0167 
Symbol 
ID8331492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp179179 
End bp180144 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID644953334 
ProductStearoyl-CoA 9-desaturase 
Protein accessionYP_003110963 
Protein GI256389399 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA CCTCGGTTCC GCAGCAGCAG CCCACCGCCC CCGCCACGGT CCGAGGAACC 
CGCGGGGGCG AGACCCAGTC CTTCAAGGAG CGCATCGCCC TCAGCTTCGT CATCGGCGTG
CCCTTCGCCG CCCTGGTGAT CGCCGTCCCC GTGGTCTGGG GGTGGGGCAT GACATGGACC
GATCTGATCA TCGCGGTGGT GATGTACGCC ATCAGCGGCC ACGGCGTGAC GGTCGGCTTC
CACCGCCTGT TCACCCATTC CTCCTTCAAG GCCAAGAAGG CACTGCGGGT GGGTCTGGCG
ATCGCCGGCT CGCTGGCGGT CCAGGGCCCG GTGATCCGCT GGGTCGCCGA CCACCGCAAG
CACCACCGCT ACAGCGACCA CGACGGCGAT CCGCACTCGC CGTGGCGCTA CGGCGAGACG
CTCCCGGCCC TGATGAAGGG CCTGTGGCAC GCGCACATCG GCTGGCTGTA CAACGCCGAG
CAGACCAACC AGCAGCAGTA CGCCCCGGAC CTGCTGAAGG ACCGGGCGAT CGTGCGCGTC
TCGCGCGCCT TCCCCTACCT GGTGCTGGTC TCCCTGCTGC TGCCGGCGGC CGTCGGCGGG
CTGGTGACCT GGAGCTGGCA GGGGATACTG ACCGCCTTCT TCTGGGGCTC GCTGGTCCGC
ATCGCGCTGC TGCACCACAC GACCTGGTCG ATCAACTCGA TCTGCCACGC CGTCGGCGAG
CGCCCGTTCC GCTCCCGCGA CCGCTCCGGC AACGTCTGGT GGCTGGCGGT GCTCTCCATG
GGCGAGTCCT GGCACAACCT GCACCACTCG GACCCGACCG CGGCCCGCCA CGGCGTGCTG
CGCGGGCAGA TCGACTCCTC GGCGCGGATC ATCTGGCTGT TCGAGAAGTT CGGGTGGGTC
CGGGATGTGC GGTGGCCTTC CCGGGAGCGG GTCGCCTTGA AATTGCGCGG TGAAGCCGCT
CCATAA
 
Protein sequence
MTQTSVPQQQ PTAPATVRGT RGGETQSFKE RIALSFVIGV PFAALVIAVP VVWGWGMTWT 
DLIIAVVMYA ISGHGVTVGF HRLFTHSSFK AKKALRVGLA IAGSLAVQGP VIRWVADHRK
HHRYSDHDGD PHSPWRYGET LPALMKGLWH AHIGWLYNAE QTNQQQYAPD LLKDRAIVRV
SRAFPYLVLV SLLLPAAVGG LVTWSWQGIL TAFFWGSLVR IALLHHTTWS INSICHAVGE
RPFRSRDRSG NVWWLAVLSM GESWHNLHHS DPTAARHGVL RGQIDSSARI IWLFEKFGWV
RDVRWPSRER VALKLRGEAA P