Gene Caci_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0152 
Symbol 
ID8331477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp161660 
End bp162997 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content70% 
IMG OID644953319 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003110948 
Protein GI256389384 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAAGG CGAGCGGGAA CGGCAAGGCG ATCCCTCGGA TTCTGATCGT GGGCGGCGGC 
TACGTCGGGA TGTACACGGC GCACCGCATC CTCAAGAAGC TCGGCAAGGA CGAAGCACTG
GTCACGGTCG TCGACCCGCG CTCGTACATG ACCTACCAGC CGTTCCTGCC CGAAGCGGCG
GCCGGCTCCC TGTCCCCGCG CCACGTCGTG GTGCCGCTGC GCTCGGTGCT CAAGCGCGCC
GAGGTGCTCA CCGCGCGGGT CACCGACATC GACCAGAACC GCAAGGTCGC CACGATCGAG
CCGATCGCCG GCGAGCCCTA CGAGCTGGAG TTCGACCAGC TGGTGATCGC CGTGGGCTCG
ATCGCGCGCA CCCTGCCGAT CCCGGGCCTG GCCGAGAACG GCATCGGCTT CAAGCAGATC
GAAGAGGCCA TAGCGCTGCG CAACCACGTC CTGGGCCAGA TGGACATCGC GGCCACCACC
AAGGACGAGA AGATCCGCCG CCGCGCGCTG ACCTTCGTCT TCATCGGCGG CGGCTTCGCC
GGCATCGAGG CGATCGCCGA GCTGGAGGAC ATGGCGCGCG ACGCCTGCAA GATCTACCCG
AACATCCGCC CGGAGGACAT GCGCTGGGTG ATGGTCGAGG GCTCCGGGCG CATCCTGCCC
GAGGTGCGGC CGGCCCTGGG CGAGTACACC GTCCACGAGC TGGAGAAGCG CGGCATCCAG
GTCAAGCTGA ACACGTTCCT GGAGTCCTGC GTCAACCGCC GCGTGCAGCT CTCCGACGGC
ACCAAGATGG TGGCCTCCAC CATCGTGTGG ACCGCCGGGG TGAAGCCGAA CCCGGTGGTG
CAGCGCTTCG GCGTGCCGCT GGGCGAGCGC GGCCACGTCA AGGCCGGCGC GACCCTGCAG
GTCGAGGGCT TCGCCGACGT CTGGTCGGCC GGCGACGGCG CGCAGGTACC GGACCTGGCC
AACCCCGGCA AGTGGTGCTC CCCCTCGGCG CAGCACGCGG TGCGCCAGGC CAAGCAGCTC
GCCGACAACG TGGTGGCGGC CGTCCGCGGC TTCGAACCCC GCGAGTACAA GCACAAGCAC
GTCGGCTCGG TGGCCTCCCT GGGCCTGCAC AAGGGCGTCG CCGACGTCTA CAACATCCGG
CTGCGCGGCT GGCCGGCCTG GTTCATGCAC CGCACCTACC ACATGAGCCG CGTCCCCACC
TTCAACCGCA AGATCCGCGT CATCGCCGAC TGGACCCTGG CCCTGTTCTT CCGCCGCGAA
GCCGTCGGCC TGGGCTCCAT CGAGCGCCCG CGCGATGAGT TCGCCGAGGC CGCCGGCGAG
CAGCGCAAGG CCGCCTGA
 
Protein sequence
MGKASGNGKA IPRILIVGGG YVGMYTAHRI LKKLGKDEAL VTVVDPRSYM TYQPFLPEAA 
AGSLSPRHVV VPLRSVLKRA EVLTARVTDI DQNRKVATIE PIAGEPYELE FDQLVIAVGS
IARTLPIPGL AENGIGFKQI EEAIALRNHV LGQMDIAATT KDEKIRRRAL TFVFIGGGFA
GIEAIAELED MARDACKIYP NIRPEDMRWV MVEGSGRILP EVRPALGEYT VHELEKRGIQ
VKLNTFLESC VNRRVQLSDG TKMVASTIVW TAGVKPNPVV QRFGVPLGER GHVKAGATLQ
VEGFADVWSA GDGAQVPDLA NPGKWCSPSA QHAVRQAKQL ADNVVAAVRG FEPREYKHKH
VGSVASLGLH KGVADVYNIR LRGWPAWFMH RTYHMSRVPT FNRKIRVIAD WTLALFFRRE
AVGLGSIERP RDEFAEAAGE QRKAA