| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0130 |
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| Symbol | |
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| ID | 8331455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 133375 |
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| End bp | 135060 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953297 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003110926 |
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| Protein GI | 256389362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCA CCAGCACCGC GCAGCAGATC TCCCGCAGGA CCGTCCTGCG TACGACCGGA
GCCGCCGCCG TCGCGGCCGT CGCCGTTCCG GCCCTGGCGG CTTGCGGGGG GTCGAAGACC
TCCTCCGGCG CCGCGCAGTC CAACGTCGAC AAGAAGCTCA TGGCCTGGCC GACCTACACT
CCGGCGGCGG GTCTGCACCC TGATATGCCT GGCACCGCGG CAGGCGTGCA GGACACGTTC
CTGCGCTATC CGTCCAACCT GATCCAGTCG GTGCCCGCCA AGCCCGGCGA CGGGTCGAAG
GTGCGCGCGC TGATCGTCAC CTACGGTACG CAGCCCAAGG GCCCGGACCA GAACCAGCTG
TGGAAGGCGG TCAACGACGC CGTCGGCGTG GACCTCGAGC TGACCATGGT CACGGACGCC
GACTGGCAGA CCAAGCTCGG CGCCATGATG GCCGCCTCGG ATCTGCCGGA CATCATCATG
CTCGGGCTCT ACCAGCTGCC GAACGAGGCG CAGTTCCTGC AGGCCAAGTG CGAGCCGCTG
GGGCAGTACC TGGCCGGGGA CGCGGGCGCG AAGGCGTATC CGAACCTGGC CGCGATACCG
CCGTACAGCT GGGATTCGGT GGGACGCGTC GGCGGCGACT TCTATGGGAT CCCGATCCAC
CGGCCGCGTC TGGGGAACTC GTTCTTCGCC GACTCCGACC TGTTCCAGCA GGCCGGGATC
TGGAACCCGA AGCCGGGCGG GCTGTCGAAG GCGGAGCTGA CCGCCGGGCT GATGAAGCTG
AACACGCAAG GGCACTTCGC GCTCGGTACC AACAAGGTCG CCTCATTCGG TTACCTGACG
CACTCCGGGG TGCACGGCAC GCCTAACCTG TGGTCGCTCG CCAACGGTCA GTTCACCACC
GCGTACGGCA CCGACAGCAT GAAGCAGTCG CTGGCGACCA TGGCCGATTG GTACGGCAAG
GGACTCTACG ACCCGGCGGC GCTGACCGTG TCGAGCACGC AGTGCAAGAC CGACTTCCAG
AACGGTACTT ACGTCACCAC CACCGACGGC TTCGGCGGGT TCGGCGGCTA CGCGACCGCC
GTCAACGAGA AGTGGAAGGT CGACTTCGTC CGGCCCTTCG ACGCCGGTAC CGGCGCCAAG
CCGACGCCGT GGCTCACCCC CGGCTACTTC GGCTACACGG TACTGAAGAA GACGACACCG
GAGCGCGCCA AGATGCTGCT CGGCGTGCTG AACTTCCTCG CCGCGCCGTT CGGCTCCAAG
GAGTGGGAGC TGATCAACTA CGGGCTCGAA GGCGTGCACT TCAACCGGGG TGCGGACGGC
GGTCCGTCGG CGCCGACCGC GTTGGGCAAG ATCGAGAACT CGGTGAACGT GCCGGTCAAG
TACGTCATGG CCGCTCCGCT GGTGAACTAC CTCGCCGGCG AGCCGGAGGC AGCCAAGCGC
TGCTATCAGG CGCAGGTGGA CATCGTGCCC ATCGGCGTGA CAGACCCGAG CCTGGGCGTC
CAGTCGGCGA CCCGGAACAA GCAGTGGCCG ACGCTCTTGC AGCAGATCCA GGACGGGATG
AACCAGATCA TCACCGGGAA GGCGCAGCTC TCGTCCTGGG ACGACGTCAT CAAGAAGTGG
AAGAGCAGCG GCGGGGACCA GATCGCCGCC GAACTCGGCG CCGAGTACGC CAAGACTCAC
GGTTGA
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| Protein sequence | MPFTSTAQQI SRRTVLRTTG AAAVAAVAVP ALAACGGSKT SSGAAQSNVD KKLMAWPTYT
PAAGLHPDMP GTAAGVQDTF LRYPSNLIQS VPAKPGDGSK VRALIVTYGT QPKGPDQNQL
WKAVNDAVGV DLELTMVTDA DWQTKLGAMM AASDLPDIIM LGLYQLPNEA QFLQAKCEPL
GQYLAGDAGA KAYPNLAAIP PYSWDSVGRV GGDFYGIPIH RPRLGNSFFA DSDLFQQAGI
WNPKPGGLSK AELTAGLMKL NTQGHFALGT NKVASFGYLT HSGVHGTPNL WSLANGQFTT
AYGTDSMKQS LATMADWYGK GLYDPAALTV SSTQCKTDFQ NGTYVTTTDG FGGFGGYATA
VNEKWKVDFV RPFDAGTGAK PTPWLTPGYF GYTVLKKTTP ERAKMLLGVL NFLAAPFGSK
EWELINYGLE GVHFNRGADG GPSAPTALGK IENSVNVPVK YVMAAPLVNY LAGEPEAAKR
CYQAQVDIVP IGVTDPSLGV QSATRNKQWP TLLQQIQDGM NQIITGKAQL SSWDDVIKKW
KSSGGDQIAA ELGAEYAKTH G
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