Gene Caci_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0126 
Symbol 
ID8331451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp129322 
End bp130161 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID644953293 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003110922 
Protein GI256389358 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CACGCGTTTT GGTGATCGGC ATCGACGGCA CACGCCTGGA CTTCCTGGAC 
GCCGAGCCGA CCCCGAACAT CGACCGGGTA GCAGGCGAAG GCTTCCTCGC CACGGTCTGG
GTCGAGGACG GCACCCCGAC CGTGTCAGGA CCCTGCTGGG CCACCGCCGT CACCGGCACC
ACGATCGAGC GACACCACAT CGGCAGCAAC GATTTCGCCG GCCACCGCCT CGCCGAACAC
CCCGACTTCC TGACCGTACT GACCCGCGAC TTCGGCCTGC ACACCTACCT CGCCGTCGGC
GCCTGGCCAC CCCTGGCCAC CCCCGCCGAC CACGGCCCGA TGTTCGCCGC ACCCTCCCGC
CTGACCTTCG CCACCTTCGG CCAGTCAGCC CAAGCCTGCG ACCAAGGCGA CGAAACCATC
ACCCGCGACG CCGAACGCAT CCTGGCCACC GAGAACATCC ACGCGGCATT CGTCTACCTC
GGCGCCAACG ACGCCACCGC CCACGACCAA GGCTGCGGCG ACCTCTATCG CACCGCCATC
CGCCGCACCG ACGCCCGCAC AGGACGCCTC CTGGCAGCCG TGGCATCCCG CCCCGACCGA
GCAACCGAAA ACTGGACCTT CATCCTCCTC ACCGACCACG GCCACCTCCC CGAAGGCGGC
CACGGCGGCA CCACCACCCC CGAACGCACC GCATGGATCG CCGCCTGCGG CCCCGGCATC
CAAGCCGGCG CCGACTACGG CACCCTGCGG CATGTGGACG TCGCCGCACA CGTGTACGCG
GCGCTGGGCG TCGAGCCGGA AATCGTGCTG GATGGAAAGG CTTTCCAGAC CATGCATTGA
 
Protein sequence
MSTSRVLVIG IDGTRLDFLD AEPTPNIDRV AGEGFLATVW VEDGTPTVSG PCWATAVTGT 
TIERHHIGSN DFAGHRLAEH PDFLTVLTRD FGLHTYLAVG AWPPLATPAD HGPMFAAPSR
LTFATFGQSA QACDQGDETI TRDAERILAT ENIHAAFVYL GANDATAHDQ GCGDLYRTAI
RRTDARTGRL LAAVASRPDR ATENWTFILL TDHGHLPEGG HGGTTTPERT AWIAACGPGI
QAGADYGTLR HVDVAAHVYA ALGVEPEIVL DGKAFQTMH