Gene Caci_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0122 
Symbol 
ID8331447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp125172 
End bp126536 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content74% 
IMG OID644953289 
ProductMgtE intracellular region 
Protein accessionYP_003110918 
Protein GI256389354 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.522016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCCC TGTCCCGGGT GTACGTCTCC CACCTCGCCG GCCGGTCCGT GTTCGACGCG 
GACGGCGAGC CGGTGGGCCG CATCCGCGAC ATCGTGGTCA GCATGGGCGC CGGCGACGCC
GCGCCCCGGG TGCTCGGCCT GGTCCTGGAG ATGCAGATGC ACGGCCGGCG GCGGGTCTTC
CTGCCGATCG GCCGGGTCAC CTCGATCGAG AGCAACCAGG TGGTCTCCAC CGGCCTGGTG
AACATGCGGC ATTTCCAGCA GCGGCCCGGC GAGACGCTGG TCCTCACCGA GCTGCTGGAC
CGCCGGGTGA CGCTGAAGGC CACCGGCGAG ACCGCGACCG TGCGCGACGT CGCCTTCGAG
CCCGAGCGCG CCGGCAAGGA GATGGCCCTC ACCAAGCTGT TCGTCCAGAA GGCGGCCAAG
ACCACGGGGC TCCGGCGGCG CGGGGAGTCG CTGACCGTGG ACTGGGACGC CGTCGAGGGC
CTGGAGGTCT CCGGCGCGCA GGGCGCCGCC GAGCTGGTCG CGGCGCTGGA CAAGCTGCAC
GCCGCCGACC TGGCGCACGT CATGCACGAG CTGTCGCCCC GGCGGCGCGG GGAGGTCGCC
GCGGCGCTGG ACGACGAGCG CCTCGCCGAC GTCATGGAGG AGCTGCCCGA GGACGACCAG
GTGGAGATCC TGGGCGAACT GGAGTCGGAG CGCGCCGCCG ACGTGCTGGA GGCGATGGAC
CCCGACGACG CCGCCGACCT GCTCGGCGAG CTGAGCGCGG ACGAGGCCGA GCGGCTGCTG
GCGCTGATGG AACCGCAGGA CGCGAACCCG GTGCGGCGGC TGCTGTCCTA CCGCGAGGAC
ACCGCCGGCG GTCTGATGAA CTCCGACCCG ATCATCCTGC TGCCGAACGC GACCGTCGCC
GAGGCGCTGG CGCTGGTCCG GGACGAGGAG CGGACGCCGG CGAACGCCTC GCTGGTGTTC
GTCACCCGCG CGCCGACGGA GACCCCGACC GGCCGCTACC TGGGCGCCGT GCACATCCAG
CGGCTGCTGC GCGAGCCGCC GATGGCGCTG GTGTCGGCGG CGGTGGACGT CGAGCTGGAG
CCGCTGGCGC CGGACACGAT GCTGAACGAG GTCACGGCGT ACATGGCGAC CTACAACCTG
GTCGCCGTGC CGGTGGTGGA CGCCGACGAC CGGCTGCTGG GCGCCGTCAC CGTCGACGAC
GTGCTGGACC ACCTGCTGCC GGACGACTGG CGGCTGCGGC CTCCGGGCAG CCACCCGCAC
GACGAGCTGC CGCCGGAGGC GCGCGAGGTC GTGGAGCTGT TGGAGGGGCA GGACGCCGCG
GACGGGGCGC CCAGCCCAAT CCGCACCGGG CCGGGGGAGG GATAG
 
Protein sequence
MRALSRVYVS HLAGRSVFDA DGEPVGRIRD IVVSMGAGDA APRVLGLVLE MQMHGRRRVF 
LPIGRVTSIE SNQVVSTGLV NMRHFQQRPG ETLVLTELLD RRVTLKATGE TATVRDVAFE
PERAGKEMAL TKLFVQKAAK TTGLRRRGES LTVDWDAVEG LEVSGAQGAA ELVAALDKLH
AADLAHVMHE LSPRRRGEVA AALDDERLAD VMEELPEDDQ VEILGELESE RAADVLEAMD
PDDAADLLGE LSADEAERLL ALMEPQDANP VRRLLSYRED TAGGLMNSDP IILLPNATVA
EALALVRDEE RTPANASLVF VTRAPTETPT GRYLGAVHIQ RLLREPPMAL VSAAVDVELE
PLAPDTMLNE VTAYMATYNL VAVPVVDADD RLLGAVTVDD VLDHLLPDDW RLRPPGSHPH
DELPPEAREV VELLEGQDAA DGAPSPIRTG PGEG