Gene Caci_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0121 
Symbol 
ID8331446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp124668 
End bp125171 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID644953288 
Productprotein of unknown function DUF1003 
Protein accessionYP_003110917 
Protein GI256389353 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.446057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG AATACATCCC GCCGCGGCTG GACCAGCCGC GCGGCCGCCG GCAGGTCTCG 
CTGAAGCCGT CGTTCGACCC GGACGCCTTC GGCCGGGTCT CGGAGACCAT CGCGCGCTTC
TTCGGCACCG CGCGGTACCT GTTCATCCAG TCCCTGATCG TCGTGATCTG GATCGCCCTG
AACATCCTGG TGGTCACCAA GGCGATCCGC TGGGACCCCT ACCCCTTCAT CCTGCTGAAC
CTGGCGTTCT CCACGCAGGC CGCGTATGCC GCGCCGCTGA TCCTGCTGGC GCAGAACCGG
CAGGCCGAGC GGGACAAGGT GCAGATCGCC GAGGACAAGG CCCGCGAGGA GCTGTCGTTC
GCGACGATGG AGTACCTGAC CCGGGAGATC GCCTCGCTGC GGATGGCGGT CGGCGAGGTC
GCGACCCGGG ACTACGTGCG CGGCGAACTC CAGTCCCTGC TCAAGGAACT GGACGAGCGC
GGCCGGGATT ACTCCGGGGA GTAG
 
Protein sequence
MAREYIPPRL DQPRGRRQVS LKPSFDPDAF GRVSETIARF FGTARYLFIQ SLIVVIWIAL 
NILVVTKAIR WDPYPFILLN LAFSTQAAYA APLILLAQNR QAERDKVQIA EDKAREELSF
ATMEYLTREI ASLRMAVGEV ATRDYVRGEL QSLLKELDER GRDYSGE