Gene Caci_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0118 
Symbol 
ID8331443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp122637 
End bp123221 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content74% 
IMG OID644953285 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003110914 
Protein GI256389350 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0320638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACGC CACACACACA GGGCCTGGAC GCCGCGACTC CCGCCGACAA CGGCGCCCCC 
GCCCCGGCCG CCCCAGCCGC CTCAGACCCG CAGGCCTGCC GCGACGAGGT GGACCGCCTG 
GTCGAAGCCT GGCGGCACGA GCGCCCCGAC CTGGACGTGG CGCCGCTGGA AGTCCTCTCC 
CGGGTCTCCC GCCTGGCCCG ACACCTCGAC CGCGCACGCC GCACCGCCTT CGCCGAGCAC 
GACCTGGAGC CGTGGGAGTT CGACGTGCTC TCCGCGCTGC GCCGCGCAGG CGCGCCGTAT 
CAGCTCACTC CCAGCAAACT GCTGACGCAG ACCCTGGTCA CCAGCGGCAC GATGACCAAC 
CGCATCGACC GGCTCGCGGC CAAGGACCTG GTCAAGCGCC TCCCCGATCC TGGCGACCGG 
CGCGGGGTGC TGGTGCAGCT GTCGGACACC GGCCGCGAGC GCGTGGACGG CGCCTTCGAA 
GGGCTGCTGG CGCAGGAGCG CGAGCTGCTC GGCGGGCTTT CCGCCGGCGA CCGCACGACG 
CTCGCCGCGC TGCTGCGGAC CCTGGTCCTG CCCTTCGACA ACTGA
 
Protein sequence
METPHTQGLD AATPADNGAP APAAPAASDP QACRDEVDRL VEAWRHERPD LDVAPLEVLS 
RVSRLARHLD RARRTAFAEH DLEPWEFDVL SALRRAGAPY QLTPSKLLTQ TLVTSGTMTN 
RIDRLAAKDL VKRLPDPGDR RGVLVQLSDT GRERVDGAFE GLLAQERELL GGLSAGDRTT 
LAALLRTLVL PFDN