Gene Caci_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0117 
Symbol 
ID8331442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp121480 
End bp122364 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID644953284 
Producthypothetical protein 
Protein accessionYP_003110913 
Protein GI256389349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0855011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTTC CCAAACTCGG TCTGCGCAAG GCCGCCGCGC TCGCGGCCGC CGCGCTGTGC 
GGCCTGGCGG TGAGCGCCGG CCCGGCGAGC GCGTCCGACG GCTGGAAGCA CCAGCCGTAC
GACTACTACC TCGCCCTCGG CGACTCGCTC GGCGCCGGCT GGCAGCCGAA CGCGGTGACC
GGCCAGGGCT ACATCAGCGG CCACGGCTAC GCCGACGACA TCGCCGCCTC GCTCAAGCTC
CAGGGCGGCA AGTACGTGAA CCTGGCGTGC CCCGGCGAGA CCACGGGCTC GATGATCCAC
GGCGGCTGCC CCTACCCGGA GCCGTACAAG AACCAGCTCG ACGCCGCCGC CTCGTTCCTG
AAGGCGCACA AGGGCGACCG GGTCCTGGTG ACCCTGGACA TCGGCGCGAA CGACGTCGAC
GGCTGCGCCA GCGCCACCGG CCTGGACATC CAGTGCGGCC TGACCGGGAT CCAGCAGACC
TCGCAGGACC TGCCGGTGAT CCTCAGGACA CTGCGCGCGG CGGCGGGGCA CAAGACGGAG
TTCGTCGGGT CGACGTACTA CAACCCGTTC CTGGCCTCGT GGCTCACCGG GTCCGCGGGC
CAGAGCAACG CCAAGCTGTC CGCGGCGTTC CTGAACCTGT TCAACGCGGT GTTCGCGATC
GAGTACCCGC TGAACGGGGT GCGCGTCGCC GACGTCAGCG CGGCCTTCTC CAGCAACGAC
TTCGTCCACC AGGTGACGCT GCAGCCCGGC GTCACCGTGC CGCTGAACGT GGCGCGCATC
TGCCAGTGGA CGTGGATGTG CGCGCCGGCG CCGGTCGGGC CCAACATCCA CGCGAACGAC
GCGGGTTACA CGGTGATGGC GAAGGCCTTC GAAGCAGTCA TCTGA
 
Protein sequence
MHVPKLGLRK AAALAAAALC GLAVSAGPAS ASDGWKHQPY DYYLALGDSL GAGWQPNAVT 
GQGYISGHGY ADDIAASLKL QGGKYVNLAC PGETTGSMIH GGCPYPEPYK NQLDAAASFL
KAHKGDRVLV TLDIGANDVD GCASATGLDI QCGLTGIQQT SQDLPVILRT LRAAAGHKTE
FVGSTYYNPF LASWLTGSAG QSNAKLSAAF LNLFNAVFAI EYPLNGVRVA DVSAAFSSND
FVHQVTLQPG VTVPLNVARI CQWTWMCAPA PVGPNIHAND AGYTVMAKAF EAVI