Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0117 |
Symbol | |
ID | 8331442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 121480 |
End bp | 122364 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953284 |
Product | hypothetical protein |
Protein accession | YP_003110913 |
Protein GI | 256389349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0855011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTTC CCAAACTCGG TCTGCGCAAG GCCGCCGCGC TCGCGGCCGC CGCGCTGTGC GGCCTGGCGG TGAGCGCCGG CCCGGCGAGC GCGTCCGACG GCTGGAAGCA CCAGCCGTAC GACTACTACC TCGCCCTCGG CGACTCGCTC GGCGCCGGCT GGCAGCCGAA CGCGGTGACC GGCCAGGGCT ACATCAGCGG CCACGGCTAC GCCGACGACA TCGCCGCCTC GCTCAAGCTC CAGGGCGGCA AGTACGTGAA CCTGGCGTGC CCCGGCGAGA CCACGGGCTC GATGATCCAC GGCGGCTGCC CCTACCCGGA GCCGTACAAG AACCAGCTCG ACGCCGCCGC CTCGTTCCTG AAGGCGCACA AGGGCGACCG GGTCCTGGTG ACCCTGGACA TCGGCGCGAA CGACGTCGAC GGCTGCGCCA GCGCCACCGG CCTGGACATC CAGTGCGGCC TGACCGGGAT CCAGCAGACC TCGCAGGACC TGCCGGTGAT CCTCAGGACA CTGCGCGCGG CGGCGGGGCA CAAGACGGAG TTCGTCGGGT CGACGTACTA CAACCCGTTC CTGGCCTCGT GGCTCACCGG GTCCGCGGGC CAGAGCAACG CCAAGCTGTC CGCGGCGTTC CTGAACCTGT TCAACGCGGT GTTCGCGATC GAGTACCCGC TGAACGGGGT GCGCGTCGCC GACGTCAGCG CGGCCTTCTC CAGCAACGAC TTCGTCCACC AGGTGACGCT GCAGCCCGGC GTCACCGTGC CGCTGAACGT GGCGCGCATC TGCCAGTGGA CGTGGATGTG CGCGCCGGCG CCGGTCGGGC CCAACATCCA CGCGAACGAC GCGGGTTACA CGGTGATGGC GAAGGCCTTC GAAGCAGTCA TCTGA
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Protein sequence | MHVPKLGLRK AAALAAAALC GLAVSAGPAS ASDGWKHQPY DYYLALGDSL GAGWQPNAVT GQGYISGHGY ADDIAASLKL QGGKYVNLAC PGETTGSMIH GGCPYPEPYK NQLDAAASFL KAHKGDRVLV TLDIGANDVD GCASATGLDI QCGLTGIQQT SQDLPVILRT LRAAAGHKTE FVGSTYYNPF LASWLTGSAG QSNAKLSAAF LNLFNAVFAI EYPLNGVRVA DVSAAFSSND FVHQVTLQPG VTVPLNVARI CQWTWMCAPA PVGPNIHAND AGYTVMAKAF EAVI
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