Gene Caci_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0112 
Symbol 
ID8331437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp115398 
End bp116318 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID644953279 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_003110908 
Protein GI256389344 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.681291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGG TTCGCAAAGC AGTCATCCCA TCGGCGGGTC TGGGCACCAG ATTCCTGCCG 
GCGACCAAGG CGACACCCAA GGAGATGCTC CCGGTCATCG ACAAGCCGAC GATCCAGTAC
GTCGTCGAGG AGGCCGTGAC CGCGGGGCTG ACCGACATCC TCATGGTGAC CGGCCGCAAC
AAGCGGCCGT TGGAAGACCA CTTCGACCGC GCCGCGGAGC TCGAGGAGGC GCTGGAGGCC
AAGGGCGACA AAGTCCGGCT GCAGCAGGTC CGGGCGTCCG CGGAGATGGC AAACGTCCAC
TATGTCCGGC AGGGCGACCC CAAGGGTCTG GGCCACGCCG TCCTGAAGGC CGAGTCCTAT
GTGCACGGCG AGCCGTTCGC CGTTCTGCTC GGCGACGACT TCATCGACGA GCGCGACCCG
CTGCTGCCGG CCATGATCGC CGTCCGGCAG CGCTACGGCG GTTCCGTGGT CGGCCTGATC
GAGGTTCCCG AAGAGCAGAT CCACATGTAC GGCTGCGCCG CGGTGAAGCC AGCGGTGGAC
GGACCAGACC TGGGCCACGA TCACACCAGC CTGATCCAGA TCACCGATCT GGTGGAGAAG
CCCTCAGTCG CGCAGGCTCC GTCGAACCTC GCGGTGATCG GCCGCTATGT GCTGGACCCC
GCCGTCATGG GCGTCCTGCG CGAGACCGCT CCGGGACGCG GCGGGGAGAT CCAGCTGACC
GACGCGCTGC GGACCCTGGC AGGCGACCCG GACATCGGCG GACCGGTCCA CGGTGTGGTG
TTCACCGGGC GCCGGTACGA CACCGGTAAC CCGATCGACT ACTTGAAGAC CGTCGTGCAG
CTCGCGGTCG ACCGTCCCGA CCTCGGTGGG GAATTCCGTG ACTGGCTGTC GTCCTATGTG
CGCGCGGGCT TCCACGACTG A
 
Protein sequence
MVEVRKAVIP SAGLGTRFLP ATKATPKEML PVIDKPTIQY VVEEAVTAGL TDILMVTGRN 
KRPLEDHFDR AAELEEALEA KGDKVRLQQV RASAEMANVH YVRQGDPKGL GHAVLKAESY
VHGEPFAVLL GDDFIDERDP LLPAMIAVRQ RYGGSVVGLI EVPEEQIHMY GCAAVKPAVD
GPDLGHDHTS LIQITDLVEK PSVAQAPSNL AVIGRYVLDP AVMGVLRETA PGRGGEIQLT
DALRTLAGDP DIGGPVHGVV FTGRRYDTGN PIDYLKTVVQ LAVDRPDLGG EFRDWLSSYV
RAGFHD