Gene Caci_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0110 
Symbol 
ID8331435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp114008 
End bp114655 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID644953277 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003110906 
Protein GI256389342 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.96396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.473446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC AATTCAACGA GCCGGGCCTT GCCAAGGGCA CGATCCGGTC ACGGTTGCTG 
GCCGCTCGGC GCGCGTACGC CCCCGAGCTG CGCGCAGCGT GGGCCGCGAC GGCGTGCGAA
GTGCTGGTGG GACAGATGAG CGGGGCGGAC GTGGTCGCCG CCTACGCCTC CTTCGGCACC
GAGCCGGACA CCGGCCCGTT GCTGGCGGAA TTGCGCGGGC GGGGTATCCG CGTCCTGTTA
CCTATTCTAG AGAATGACAT GGACCTGTCG TGGGGGCGGT ACTCAGGCCC TGATTCACTC
GTTCGAAGGA TCCCTCCGGG CGGCTCCGCC CCCGGACCGA TCCCCGAGCC CGCCGAGTCG
CTGGGTCTGG ACGCGGTGTT GTCAGCCTCC TGGATCGTGG TCCCCGCCCT GGCCGTCTCG
CCCGCCGGGA TCCGCATGGG ACGCGGCGGC GGCAGCTACG ACCGGGTGCT GACCAGGATC
GAGGCGTCCC CGCGCGGTGC GCGCCCCCGG GTCGCGGCCC TGCTCTACCC CGGCGAGCTC
GGCGTGGACA TCCCGGTCGA GCCGCACGAT CGCGCCGTCG ACATGGCGGT CGCCGGGGAA
AGCGTTCGCC ACTGGGACGA ATCTCCCGGC GGGGTTCTCT CGCGCTGA
 
Protein sequence
MTNQFNEPGL AKGTIRSRLL AARRAYAPEL RAAWAATACE VLVGQMSGAD VVAAYASFGT 
EPDTGPLLAE LRGRGIRVLL PILENDMDLS WGRYSGPDSL VRRIPPGGSA PGPIPEPAES
LGLDAVLSAS WIVVPALAVS PAGIRMGRGG GSYDRVLTRI EASPRGARPR VAALLYPGEL
GVDIPVEPHD RAVDMAVAGE SVRHWDESPG GVLSR