Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0106 |
Symbol | |
ID | 8331431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 109615 |
End bp | 110286 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953273 |
Product | nitroreductase |
Protein accession | YP_003110902 |
Protein GI | 256389338 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0309697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.07675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTT ACGAAGCGCT CTACACCACC CGGGCCATGC GCCGGGTCAA GCCCGACCCG ATCCCGGAGT CCGTCCAGGC CCGCATCCTG GACGCCGCGA TCCGCGCGCC CTCCGGCGGC AACGGGCAGA ACTGGCGGTT CCTGCTCCTC GACGACCCCG AGAAGAAGAA GCTCCTCGGC CCGCTCTACC GCGACGCCCT CGACCAGCTC TACACGACGG TCTACGCCCC GATGCTGGCC GCGATCGCCG CCGACCCGGA CAGCCCCGAG TCGCGCCAGA TGGCGAAGGT CACGAAGTCC TCCCGGTGGC TCGGCGAGAA CTTCGAGCAG GTCCCGCTGT TCCTGTTCGC GTTCGTCCAG CGCGACCGCT CCGGCGGCTC GATCTTCCCG GCGGTCTGGA ACGCGCAGCT GGCCGCCCGC GCCCAAGGCG TCGGCAGCGC GCTGACCTCG ATCCTCGGCG GCTTCCATGA CCAAGAGGTC AAGGAGATCC TCGGCGTGCC GGCCGAGGAG AAGTGGACCC AGTCCTGCTG CGTGTCCTTC GGCTACCCGA CCGGCCGCTG GGGCGTCGCC CCGCGCCGTC CCGCGCACGA GGTCGCGTAC CGGAACGGCT GGGGCGAGCC GGTGGGCTTC ACCGTCGACG AGCCGCTGTG GCAGCCCTCC CCCGAGTCCT GA
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Protein sequence | MDIYEALYTT RAMRRVKPDP IPESVQARIL DAAIRAPSGG NGQNWRFLLL DDPEKKKLLG PLYRDALDQL YTTVYAPMLA AIAADPDSPE SRQMAKVTKS SRWLGENFEQ VPLFLFAFVQ RDRSGGSIFP AVWNAQLAAR AQGVGSALTS ILGGFHDQEV KEILGVPAEE KWTQSCCVSF GYPTGRWGVA PRRPAHEVAY RNGWGEPVGF TVDEPLWQPS PES
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