Gene Caci_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0103 
Symbol 
ID8331428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp106844 
End bp107413 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID644953270 
ProductFHA domain containing protein 
Protein accessionYP_003110899 
Protein GI256389335 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0428649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0274724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGTC CTTCGTTCGG GAACGCCGGA TGGCAGCCGC CGGACTTTCG GCCGTCGGAC 
GCCGAGCGCG ACAACGCCAT CGACGCGCTG TCGGCCGGCG CCGAAGCCGG CCGCCTGTCC
AGCGACACCT TTTCGCACCG CCTGGACCAG GCCCTGGCGG TGCAGTCACA CAGCGAGCTG
ACCCAGCTCG TCTCCGACCT GCCGATCCCG GCCGACCAGC CGGGCTTCGG CCAGCGCGTG
GTGAACGCGG TCTCGGCCGT CGCGCACTTC CGCTTCAAGG TCAAGGCAGC CTGGCGCGGA
CCTTCCCTGC CCCGCCTGTC CCTCCCCGGC GGCCCGCAGG TCACCCTCCG CATCGGCCGC
ATGCCCGAAT GCGACCTGCA GCTGTTCGAC ACCACGGTGT CCCGCTACCA CGCCGAGTTC
CGCCGCTCCC AGAACGGCTG GTTCCTGGTG GACCTGGGCT CCACCAACGG CACCCGGGTC
AACGGCTGGC GCATCACCGC TCCCACCGCC GTGCAACCCG GCGACGAGGT CTCCTTCGGC
TCAGTGGTCT TCTCCCTGAA CGGCCGCTGA
 
Protein sequence
MGGPSFGNAG WQPPDFRPSD AERDNAIDAL SAGAEAGRLS SDTFSHRLDQ ALAVQSHSEL 
TQLVSDLPIP ADQPGFGQRV VNAVSAVAHF RFKVKAAWRG PSLPRLSLPG GPQVTLRIGR
MPECDLQLFD TTVSRYHAEF RRSQNGWFLV DLGSTNGTRV NGWRITAPTA VQPGDEVSFG
SVVFSLNGR