| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0103 |
|---|
| Symbol | |
|---|
| ID | 8331428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 106844 |
|---|
| End bp | 107413 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953270 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_003110899 |
|---|
| Protein GI | 256389335 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0428649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0274724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGTC CTTCGTTCGG GAACGCCGGA TGGCAGCCGC CGGACTTTCG GCCGTCGGAC
GCCGAGCGCG ACAACGCCAT CGACGCGCTG TCGGCCGGCG CCGAAGCCGG CCGCCTGTCC
AGCGACACCT TTTCGCACCG CCTGGACCAG GCCCTGGCGG TGCAGTCACA CAGCGAGCTG
ACCCAGCTCG TCTCCGACCT GCCGATCCCG GCCGACCAGC CGGGCTTCGG CCAGCGCGTG
GTGAACGCGG TCTCGGCCGT CGCGCACTTC CGCTTCAAGG TCAAGGCAGC CTGGCGCGGA
CCTTCCCTGC CCCGCCTGTC CCTCCCCGGC GGCCCGCAGG TCACCCTCCG CATCGGCCGC
ATGCCCGAAT GCGACCTGCA GCTGTTCGAC ACCACGGTGT CCCGCTACCA CGCCGAGTTC
CGCCGCTCCC AGAACGGCTG GTTCCTGGTG GACCTGGGCT CCACCAACGG CACCCGGGTC
AACGGCTGGC GCATCACCGC TCCCACCGCC GTGCAACCCG GCGACGAGGT CTCCTTCGGC
TCAGTGGTCT TCTCCCTGAA CGGCCGCTGA
|
|---|
| Protein sequence | MGGPSFGNAG WQPPDFRPSD AERDNAIDAL SAGAEAGRLS SDTFSHRLDQ ALAVQSHSEL
TQLVSDLPIP ADQPGFGQRV VNAVSAVAHF RFKVKAAWRG PSLPRLSLPG GPQVTLRIGR
MPECDLQLFD TTVSRYHAEF RRSQNGWFLV DLGSTNGTRV NGWRITAPTA VQPGDEVSFG
SVVFSLNGR
|
|---|
| |