Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0100 |
Symbol | |
ID | 8331425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 103647 |
End bp | 105341 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953267 |
Product | Allophanate hydrolase subunit 2 |
Protein accession | YP_003110896 |
Protein GI | 256389332 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.368046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0250714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTACCCG CGGGCCCATT CGGGGTACTG CTCGAGTTCG ATTCTTTGGA CAAAGTTCAG CGCTGCTTCG CATGGGTCGA GCGCTGGCGC ACGGCGCGGC CGGGAGTGCT GGTCGATGTG GTGCCCGCCG AGCAGACGCT GATGGCCATC GCGACGTTCG ACGACGCGGG GCAGCGCGGG TTGCGGGAGT TCGTCGCGGC GGTCGGGGCT GTGGACTGGG CTGATGCCGG TACGGACGAT GACGCGGCAC CTGCCGCAGA CGCCGAGACT GTCGAACTCC CGGTGACGTA CGACGGCCCA GATCTGGACG ATGTGACCCG CCTGACCGGG CTTGCCGCAA ACGAGATCGT TTCGTTGCAC ACGGAAGCCG AATTCACCGT CGCGTTCACA GGTTTCGCGC CGGGCTTCGC GTACCTGACC GGCTTGCCGG ACGCGCTACG CGTGCCCCGC CGCGATGCGC CGCGCACCCG CGTGCCGACC GGAGCGGTGG CATTGGGTGG GCCGTACAGC GGCGTCTATC CGCGCGAATC CCCGGGCGGC TGGCAGCTGA TCGGGCAACT GGCGCCATGG GCCCCGACAC TGTGGGACGA GACGCGGGAA TCGCCGGCCC TGCTGCGGCC AGGCACACGG GTCCGGTTCG TCGACGCAGC CGGGCAAAGC GCTCCGGACA GCAGCGCTCC CGCCAAGCTG ACGCAGGCCA CCGCGGCAGC CACGGAACCC GGCCTGCGGG TGGTCCGCGC CGGACCACTG ACGACCGTGC AGGACCTCGG CCGACCGGGC TTCGCGCACC TCGGCGTGCC ACGCTCAGGA GCGGTCGACC GGACATCGCT GAAGCTCGCC AACCGCTTGG TGGGCAACGA AGAGGGCGCC GCAGCCCTCG AGCTGACACT TGGCGGCGGA GCGGTGCAGC TCGAAGTCGG ACGCTGGGTC GCGGTTACCG GGGCACGGTG CGAGATCACG ATGACGGTGC CGGCACCCGA GTCGGCGCTT GAGCCTGCCG CCGCTCGCGA GGTCGGCCCT GATCGAAAGT CCGCACCCGC AGCCGGGCCC TCCCACCGGC CGATTGTTAT GCGAACTGTG CCAGGCACTG CTTTTTATGC GCCTGAGGGC GCCGTGGTTG AGGTGGGGCC GGCGGTGGCG GGGGTGCGCG CTTACCTTGC CATGGCCGGT GGGGTGGGGG GTTTTGAGGT GTTGGGGAGT CGGTCCGTTG ATCTCCTTTC GGGGGTTGGG GGGCGGGCTC TGGGGGGCGG GGCGCGGGTC GGTGTGGGCG TGCCGGTGGG GTTGCCGCCG GATATCCCGG GGTTGGGGAT GGCACCGGTG CGGGATGTGG GGGATCCGGT GGTGGTGCGG TTGGTTTTGG GGCCCCGGAG TGAGTGGTTC ACGGATGACG CGGTGCGGGA TCTGGTTGCG GCGCGGTGGA CGGTGGGAGT GGAGTCGAAT CGGACCGCGG TGCGGTTGGA CGGGCCTTCG TTGGCGCGGG CGCGTGATGG GGAGCCCGCC AGCGAGCCTT TGGTCGTGGG GGCTGTGCAG GTGCCTCGGG ATGGGCGGCC GCTGCTGTTC TTGGCCGACC ATCCGGTGAC CGGGGGGTAT CCGGTGATCG CGTGTGCCCA TCCGGCGGAT GTGGATGCCG CGGGGCAGGC GCGACCGGGG ACGGGGATCC GGTTCCGGAT GGTCGGTGGG CTGGCTTCGC GGTGA
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Protein sequence | MLPAGPFGVL LEFDSLDKVQ RCFAWVERWR TARPGVLVDV VPAEQTLMAI ATFDDAGQRG LREFVAAVGA VDWADAGTDD DAAPAADAET VELPVTYDGP DLDDVTRLTG LAANEIVSLH TEAEFTVAFT GFAPGFAYLT GLPDALRVPR RDAPRTRVPT GAVALGGPYS GVYPRESPGG WQLIGQLAPW APTLWDETRE SPALLRPGTR VRFVDAAGQS APDSSAPAKL TQATAAATEP GLRVVRAGPL TTVQDLGRPG FAHLGVPRSG AVDRTSLKLA NRLVGNEEGA AALELTLGGG AVQLEVGRWV AVTGARCEIT MTVPAPESAL EPAAAREVGP DRKSAPAAGP SHRPIVMRTV PGTAFYAPEG AVVEVGPAVA GVRAYLAMAG GVGGFEVLGS RSVDLLSGVG GRALGGGARV GVGVPVGLPP DIPGLGMAPV RDVGDPVVVR LVLGPRSEWF TDDAVRDLVA ARWTVGVESN RTAVRLDGPS LARARDGEPA SEPLVVGAVQ VPRDGRPLLF LADHPVTGGY PVIACAHPAD VDAAGQARPG TGIRFRMVGG LASR
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