Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0098 |
Symbol | |
ID | 8331423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 101920 |
End bp | 102750 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953265 |
Product | hypothetical protein |
Protein accession | YP_003110894 |
Protein GI | 256389330 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0307347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGACTG CCCAGGCAAT GAGTGAGCCG TTGTTCCAGA ATCTGGAAGA CGCCGTCGTG GTGGCCGAGA CGGCCCTGCT GGACACGCAG GTGGCCGTCG AGTCGCTGCG TGCCGAGTTG GACCAGTTCA CCCGGCTGCA CCAGATCCAA CTGGGCCCCC TGTACGGCCG GCTGGACGAG CTGGACGCGC TCACCGCCGA GACCGAAGCC GCCATGACCG GCGACCCCGA GGCCATCCGC CGTGCGGTGG AGGCCCGGGC GCGGGTCGAT GGCGAGGACC CGATGCTGTT CGCCGCCGCG AACGCCGGGC TGCTCGAGGA CGACGGGGAG GGCGGCTCCG AGCACGAGCA GAAGCCGCCG CGTCCTCGCG AGGAGGCGGC CCCGACCCCC GACCCGGACG TCCCGGTGCG CCCGAGCAAG ACCGCGCAGC GGCTCTACCG CGAGCTGGCG CGCCGGTCGC ACCCGGACCT CGTCCAGGAC CAGGCCGAGA TCGCCCGCCG CTCGGCGTTC ATCACCCGCG TCAACGCCGC CTACGAGAAG GACGACCTGC CGGCGCTCCA GAAGCTCAGC GAAGAATGGT CGCTGACCTC CTCGGGCCCG GCGGTGGACA GTCCGCAGCG CGAGATGTGG CTCCAGCACC GCCTGATCTG GCTGCGCGTG AAGCAGGCAG AGCTGGCACT GGAGCGCCAG ACGCTGATGG AGAACCCCAT GGCGGACGTG CTCGCGGCCT ACCAGTACGA CTCGCTGACG GCGCTGCGCT CGATCTCCGA GCAGCTCTAC ACGGCGATCG CCGAGCGGGA GACCCTGCTG AACGCGCTCA TCGGTTCCTG A
|
Protein sequence | METAQAMSEP LFQNLEDAVV VAETALLDTQ VAVESLRAEL DQFTRLHQIQ LGPLYGRLDE LDALTAETEA AMTGDPEAIR RAVEARARVD GEDPMLFAAA NAGLLEDDGE GGSEHEQKPP RPREEAAPTP DPDVPVRPSK TAQRLYRELA RRSHPDLVQD QAEIARRSAF ITRVNAAYEK DDLPALQKLS EEWSLTSSGP AVDSPQREMW LQHRLIWLRV KQAELALERQ TLMENPMADV LAAYQYDSLT ALRSISEQLY TAIAERETLL NALIGS
|
| |