Gene Caci_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0098 
Symbol 
ID8331423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp101920 
End bp102750 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID644953265 
Producthypothetical protein 
Protein accessionYP_003110894 
Protein GI256389330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0307347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACTG CCCAGGCAAT GAGTGAGCCG TTGTTCCAGA ATCTGGAAGA CGCCGTCGTG 
GTGGCCGAGA CGGCCCTGCT GGACACGCAG GTGGCCGTCG AGTCGCTGCG TGCCGAGTTG
GACCAGTTCA CCCGGCTGCA CCAGATCCAA CTGGGCCCCC TGTACGGCCG GCTGGACGAG
CTGGACGCGC TCACCGCCGA GACCGAAGCC GCCATGACCG GCGACCCCGA GGCCATCCGC
CGTGCGGTGG AGGCCCGGGC GCGGGTCGAT GGCGAGGACC CGATGCTGTT CGCCGCCGCG
AACGCCGGGC TGCTCGAGGA CGACGGGGAG GGCGGCTCCG AGCACGAGCA GAAGCCGCCG
CGTCCTCGCG AGGAGGCGGC CCCGACCCCC GACCCGGACG TCCCGGTGCG CCCGAGCAAG
ACCGCGCAGC GGCTCTACCG CGAGCTGGCG CGCCGGTCGC ACCCGGACCT CGTCCAGGAC
CAGGCCGAGA TCGCCCGCCG CTCGGCGTTC ATCACCCGCG TCAACGCCGC CTACGAGAAG
GACGACCTGC CGGCGCTCCA GAAGCTCAGC GAAGAATGGT CGCTGACCTC CTCGGGCCCG
GCGGTGGACA GTCCGCAGCG CGAGATGTGG CTCCAGCACC GCCTGATCTG GCTGCGCGTG
AAGCAGGCAG AGCTGGCACT GGAGCGCCAG ACGCTGATGG AGAACCCCAT GGCGGACGTG
CTCGCGGCCT ACCAGTACGA CTCGCTGACG GCGCTGCGCT CGATCTCCGA GCAGCTCTAC
ACGGCGATCG CCGAGCGGGA GACCCTGCTG AACGCGCTCA TCGGTTCCTG A
 
Protein sequence
METAQAMSEP LFQNLEDAVV VAETALLDTQ VAVESLRAEL DQFTRLHQIQ LGPLYGRLDE 
LDALTAETEA AMTGDPEAIR RAVEARARVD GEDPMLFAAA NAGLLEDDGE GGSEHEQKPP
RPREEAAPTP DPDVPVRPSK TAQRLYRELA RRSHPDLVQD QAEIARRSAF ITRVNAAYEK
DDLPALQKLS EEWSLTSSGP AVDSPQREMW LQHRLIWLRV KQAELALERQ TLMENPMADV
LAAYQYDSLT ALRSISEQLY TAIAERETLL NALIGS