| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0088 |
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| Symbol | |
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| ID | 8331413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 90866 |
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| End bp | 91813 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953255 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003110884 |
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| Protein GI | 256389320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.152071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCT GGGGACCGCA AGGCGTCAGT GGAAAAGTCG TGGTCATCAC CGGTGCGGCA
CGCGGAATCG GCGCGGACGC CGCACGGCGC CTGGCCCGCC GCGGAGCGAA GGTCGCGCTG
ATCGGGCTGG AGCCGGAGGA GCTGCGCAAG ACCGCGGAGT CCTGCGGACC CGACGCCACC
GCGTGGGACG CCGACGTGAC CTCCTGGGAG CAGCTCGGTG CGGCGATCGA CGGCATCGTC
GACCACTACG GCGGGATCGA CGTCGTCGTG GCCAACGCCG GCGTCGCCCC GACCGGGTTC
ATCCGCTCCA TCGACCCGTC GGCGTTCGAG CGCACCATCG AGATCAACCT GCTCGGTGTC
TGGCGGACGG TACGCACCGC GCTGCCGCAC ATCATCAAGA ACAAGGGCTA TGTACTCGTG
GTCTCCTCTG CGGCGGCCTT GATCCATCCC CCTGCGTTGG CCGCTTATAC GGCGTCTAAG
GCCGGCGCAG AAGCGTTCGG CGACAGTCTG CGCGCAGAAG TGAAACACCT AGGCGTTGAT
GTCGGTGTCG CCTACTTCTC CTGGATCAAG ACGGACTTGG TGACGAGTGC GGACGCGCAT
CCCGTCCTGG GCAAGTTCCG TACAAGCGCT CCCGGTCCGG CGTCCCGTGT GTATCCCTTG
GAGAAGGTCG GCCAGGCGGT CGCCGACGGA ATCGCTAAGC GCAGCCGCGT TATCTGCGTT
CCCTCCTGGG TCAACCAGCT ACGCCGCTTC CACGGGATGC TGCCTGCCAT CGTGGAGAAG
GCCAACGCCC GAGCGACCGC CCGCGCCGAC CGCGAGATGA TCGCGGACAT CGAGAAGCGC
GGCGTCGAAG CGTCTTCGCG GCTGACCGGT CCTGGCGGAG CAGCCGCGCA GGCGGCTAAA
GAAGCGATCC AGCCAGTCGG TCGAGAGCTG CCGCAGGATC AGCGGTAA
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| Protein sequence | MGTWGPQGVS GKVVVITGAA RGIGADAARR LARRGAKVAL IGLEPEELRK TAESCGPDAT
AWDADVTSWE QLGAAIDGIV DHYGGIDVVV ANAGVAPTGF IRSIDPSAFE RTIEINLLGV
WRTVRTALPH IIKNKGYVLV VSSAAALIHP PALAAYTASK AGAEAFGDSL RAEVKHLGVD
VGVAYFSWIK TDLVTSADAH PVLGKFRTSA PGPASRVYPL EKVGQAVADG IAKRSRVICV
PSWVNQLRRF HGMLPAIVEK ANARATARAD REMIADIEKR GVEASSRLTG PGGAAAQAAK
EAIQPVGREL PQDQR
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