Gene Caci_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0087 
Symbol 
ID8331412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp90541 
End bp90918 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID644953254 
Producthypothetical protein 
Protein accessionYP_003110883 
Protein GI256389319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.193229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTC AGCCCTACGA GTACTCCGTG CTGCGCGCGG TTCCCCGTGT GGAGCGCGGC 
GAGTACGTCA ACGTCGGTGT CGTGCTCTAC TGCCAGCAGC TCGACTTCCT CGGATGCGCC
ACGCAGTTGG ATTCAGTGCG GGTGCGCGCA CTCGATCCCA CAGCGGACGT TGAGGGGATC
GAGGCGCTGC TCGGCGCGGT CTCGAAGGTG TGCTGTGGCG GACCGGACTC CGGCCCTGCC
GGTCAGGACG CCATGGGCCG GCGGTTCCGG TGGCTGATCG CGCCGCGCTC CACCGTGGTG
CAGCCCGGTC CTGTGCACAC CGGTCTTACC GCTGATCCTG CGGCAGCTCT CGACCGACTG
GCTGGATCGC TTCTTTAG
 
Protein sequence
MSVQPYEYSV LRAVPRVERG EYVNVGVVLY CQQLDFLGCA TQLDSVRVRA LDPTADVEGI 
EALLGAVSKV CCGGPDSGPA GQDAMGRRFR WLIAPRSTVV QPGPVHTGLT ADPAAALDRL
AGSLL