Gene Caci_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0082 
Symbol 
ID8331407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp84577 
End bp85245 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content74% 
IMG OID644953249 
ProductGrpE protein 
Protein accessionYP_003110878 
Protein GI256389314 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG AGTACGCGGC CGAGCGGGAA GGCGAGGGCG AGCGCGCCAA CCTCGCGGTG 
ACCGAGCTGC TGGCCAAACT CGCCGAGCGG ACCAACGAGC TGCAGGGCGT GCAGGCCGAG
TTGTCCGAGC GCACCAACGA CCTGCAGCGG CTGCAGGCCG AGTTCAGCAA CTACAAGAAG
CGGGTCGAGC GGGACCGGCA GGTGGTCAAG GAGACCGCCG TGGCCGGCGC GCTGTCCGAG
CTGCTCCCGG TGCTGGACGA CATCGGCCGG GCGCGCGAGC ACGGCGAGCT GGAAGGCGGG
TTCCGCCAGG TCGGCGAGGC CTTCGAGGCC GTGGTGGCCA AACTGGGCCT GGCCCGGTTC
GGCGCGGCCG GGGAGCTCTT CGACCCGAAC CTGCACGAGG CCCTGCTGAG CACCACGTCC
CCGGACGTGG ACGAGGTGAC CGTGGCGGTG CTGTTCCGCC CCGGCTACCG GATCGGCGAG
CGCGTGGTCC GCGCGGCGCA GGTGCAGGTC GCCGAGCCCG GACCGGCTTT GGAGACCGAG
CCGGCACCCG AGCCGGCGCC CAAGCCCAAG CCCGCGGCAC CGGCCGCGAA GCGTGCGCCG
GGCGGAGCCG GCAAGACGGC GGCCGAGCCG GCCGCCGAGG TCGACGACGA CGACGATTCG
GGACTGTGA
 
Protein sequence
MSDEYAAERE GEGERANLAV TELLAKLAER TNELQGVQAE LSERTNDLQR LQAEFSNYKK 
RVERDRQVVK ETAVAGALSE LLPVLDDIGR AREHGELEGG FRQVGEAFEA VVAKLGLARF
GAAGELFDPN LHEALLSTTS PDVDEVTVAV LFRPGYRIGE RVVRAAQVQV AEPGPALETE
PAPEPAPKPK PAAPAAKRAP GGAGKTAAEP AAEVDDDDDS GL