Gene Caci_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0076 
Symbol 
ID8331401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp77516 
End bp78517 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID644953243 
ProductNAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_003110872 
Protein GI256389308 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCA TCACGATCGC CGAGCCGGGC GGACCGGAGC AGTTGGTGTG GACCGAGGTG 
CCCGATCCGG TCGTCGCGGC CGGCGAGGTG CTGATCCAGG TCGCCGCGAC CGCGGTGAAC
CGCGCGGACA TCTTGCAGCG CAGAGGTTTC TACACGCCCC CTCCGGGAGC CTCGTCCTAT
CCAGGGCTGG AGTGCTCCGG ACGGGTCGTC GAGGTCGGCG CCGGAGTGAG CGGGTTCGTG
CCGGGCGACG AGGTCGTGGC GCTGCTGACC GGCGGCGGGT ACGCCGAGCT GGTCGCGGTG
CCCGCCGGGC AGGTCGCGCC GCTGCCGAAG GGCCTGAGCG CGCTGGCCGC CGGCGGTCTG
ATGGAGACGG TGTGCACCGT CTGGTCGAAC GTCTTCATGC TCGCCGGGCT CCAAGCCGGG
CAGACGCTGC TGGTCCACGG CGGCTCCAGC GGCATCGGGA CCACCGCGAT CCAGCTCGCG
CACCAGCTCG GGGCACGGGT GATCGTCACC GCCGGCACCG CGGCCAAGCT CCGCGCCTGC
CGGGACCTCG GCGCCGACGT CGGGGTGAAC TACCGCGACG AGGATTTCGT GGAGAGGGTT
GCCGAGGTCA CCGACGGCCA AGGCGTGGAT GTGATCCTCG ACAACATGGG CGCCGTCTAC
CTGGACCGCA ACGTCCAGGC GCTGGCGGTG GACGGCCGGC TGGTGATCAT CGGTTTGCAG
GGCGGGGTCA CCGGCGAGGT GAATCTGAAC ACCCTGCTGC GCAAGCGGGC CGGCATCAGT
GCAACCACAC TGCGTGCGCG GCCGTCAGAA GAGAAGGCGC GGATCGTCGC GGCGGCGCGG
GACGCCGTGT GGCCGCTGAT CGAACAGGGC CGCTTCCGGG TGGTCGTGGA CCGGGTGCTG
CCGGTCGACC GGGCGGCCGA GGCCCACCGG GTGGTCGAGG ACAGCGGGCA CGTCGGCAAG
GTCGTGCTCG ACGTGGCGAC GGTACGCGGC AGCAGCAGCT AA
 
Protein sequence
MRAITIAEPG GPEQLVWTEV PDPVVAAGEV LIQVAATAVN RADILQRRGF YTPPPGASSY 
PGLECSGRVV EVGAGVSGFV PGDEVVALLT GGGYAELVAV PAGQVAPLPK GLSALAAGGL
METVCTVWSN VFMLAGLQAG QTLLVHGGSS GIGTTAIQLA HQLGARVIVT AGTAAKLRAC
RDLGADVGVN YRDEDFVERV AEVTDGQGVD VILDNMGAVY LDRNVQALAV DGRLVIIGLQ
GGVTGEVNLN TLLRKRAGIS ATTLRARPSE EKARIVAAAR DAVWPLIEQG RFRVVVDRVL
PVDRAAEAHR VVEDSGHVGK VVLDVATVRG SSS