| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0050 |
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| Symbol | |
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| ID | 8331375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 49782 |
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| End bp | 50486 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644953217 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003110846 |
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| Protein GI | 256389282 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCC TCGGTGTCGC GTTCACCGGA GTCGTGGCTG GAGTGTCCGC GGGCTTGTCG
GTGCTGTGCT GGCCGCCCCG GCAGCAGGGA CACCCCGCAC GCCGATTGGC TTTTCTGGCA
ACGCGAAACA CGACTGCAGA CCACACACGC TCGCGACCGT GGTCGGCGTT TCTCAAACGT
TTGAGAAACA ATCCCTGGAG CACGGCCCGC CACCAGAGGC AGCACAGCGA GGCGACGGCG
CGCATATCCC CCGTCGCCGC GGATCTGCTC GCCGCGTGTC TGGCTTCCGG CGCCGATCCA
CTGCGCGCCG CCGAAGTGGT GGCGTACTGC CTGCGACCGC CGGGGCGGCT GGGCACGCTC
GGCGAACGGG CCGCAGCCGA GATGGCAGAC CGCTTCCAGG AGGTCGCGCA CCTGCTGCGA
CTTGGCGGCA ACCCGATCAC CACCTGGCGC GTGGTCGCCG CCGAACCCGG CCTGCGCCCG
GTCGCCGAAG CCATCGGCCG CGCCGGACTG TCCGGTGCCC CGCCGGTCGC CTCGATCCGT
GCCTGCGCAA CGGATCTGCG CAAGGAGCGG CATGCCGCGA GCACCGCCGC CGCGCGCCGT
GCCGGGGTCC GCGGCGTGGC ACCGCTGGCC GGCTGCTTCC TGCCCGCCTT CGTGCTGATC
GGGGTCACGC CGATCGTCCT GGGCCTGGCC CACCACCTGC TCTGA
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| Protein sequence | MSVLGVAFTG VVAGVSAGLS VLCWPPRQQG HPARRLAFLA TRNTTADHTR SRPWSAFLKR
LRNNPWSTAR HQRQHSEATA RISPVAADLL AACLASGADP LRAAEVVAYC LRPPGRLGTL
GERAAAEMAD RFQEVAHLLR LGGNPITTWR VVAAEPGLRP VAEAIGRAGL SGAPPVASIR
ACATDLRKER HAASTAAARR AGVRGVAPLA GCFLPAFVLI GVTPIVLGLA HHLL
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