Gene Caci_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0038 
Symbol 
ID8331363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp40430 
End bp42532 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content71% 
IMG OID644953205 
Productserine/threonine protein kinase 
Protein accessionYP_003110834 
Protein GI256389270 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAA CCTACCCCGG TGCGGAACAG CCGCGGCGGC TCGGCGGCAG GTACGAGCTG 
GGCGCGGTGC TGGGCCGAGG CGGGATGGCC GAGGTCTTCA TGGCCCGCGA CACCCGGCTG
GGCCGCACGG TCGCGGTCAA GACCCTGCGG GCCGACCTGT CCCGGGACCC CACGTTCCAG
GCACGGTTCC GCCGCGAGGC GCAGTCCGCG GCCTCGCTCA ACCACCCGGC GATCGTGGCG
ATCTACGACA CCGGCGAGGA CTTCGAGAAC GGCGTCTCGG TCCCCTACAT CGTGATGGAG
TACGCCGACG GCTCCACGCT GCGCGACCTG CTGCACTCCG GCCGCCGGCT GCTGCCCGAG
CGGGCCCTGG AGATCACCGC CGGCGTGCTG CAGGCTCTGG ACTACTCCCA CCGCAACGGC
ATCATCCACC GCGACATCAA GCCCGCGAAC ATCATGCTGA CCCGGTCCGG CACCGTGAAG
GTGATGGACT TCGGCATCGC CCGCGCCATG GCCGACAACG GCATGACGAT GACGCAGACC
GCCGCGGTCA TCGGCACCGC GCAGTACCTG TCGCCGGAGC AGGCCAAGGG CGAGACCGTC
GACGCCCGCA GCGACCTGTA CTCCACCGGC TGCCTGATGT TCGAGCTGCT CACCGGCCGC
CCGCCCTTCG TCGGCGACTC CCCAGTCGCC GTGGCCTACC AGCACGTGCG CGAGGAGCCG
CAGCCGCCGT CCTCCTACGA CCCCGAGGTC AGCCCGGCGA TCGACGCGGT GGTGCTCAAG
TCGCTGGCCA AGACCGCCGA CGCGCGCTAC CAGTCGGCGA CCGAGATGCG CGCCGACATC
GAGCGGGTGC TCGACGGGCG CCCGACCGAG GCGCAAACCG CGGTGCTGGG CGCGGCGAAC
ATGCCGACCC AGCGGCTGGA CCCGCGCCAG GTGGGCGCCG CGGCCGCGGT CGGCCAGACC
CGGGCGATGC CCGCGGTCGA CACGCCGACC GGCTACCAGA GCCCCGCGCC GCGCTACGAG
GAGGGCCTGG ACGGACCCGG CGGCCGCCCG CCGGGTCCGC CGCGCCGCGC CGAGCCGCGC
AGAGCCCCCG AGCCGGAGAA GAGCGGCCGG ACCGGCTACA TCATCTTGGC CATCGCCGGC
ATCGCCGCGG TGATCGCCGC GATCCTGCTG GCCAAGTCGC TGCTGAAGTC CGGCGGCAAC
GCCAGCTCCA AGGCGGCGCC GGACTTCGGC ATCGGGGTGA AGACCTTCCC GCAGGCGCAG
CAGATGCTGG CGCAGCCGGA TTACACGGGG TTCAGCCTTA CCGGCAGCGG CAAGGACTGT
CCCCCCGGAA CCGACGTGCA CTCCGGGAAC GCCGGGACGA TCATCGCCCA GAGCCCGGCG
GCCGGCGCCT ACGGGAAGCC GGGACCGATC ACCTACTGCC TGTCGCTGGG CCCGCAGAAC
GGCAAGGTAC CGCCGAAGGC CACCCTCAAC GGAATGAACC AGGACCAGCT CAAGGCCTAT
CTGGGCGGCG CCCACTTCGA CCTCGCCAAC CCGCTGATCA CCTCGCAGCC CGATCCCAAG
GTCCTGGCGG GCAACATCAT CGACGTGATC GACGCGGGCA ACAACAACGC GGTGCTCGAC
GGCCAGCAGG TTCCCGACGT GAGCAAGGTT CAGATCGGCT GGATCGTCTC GGCCGGCCCG
TCGAAGATCC CGCTCAGCAC CCAGGGCTAC ATCGGCCAGC CGTACAACAG CGTCGTCTCG
CAGATCCAGG GGCTGGGCTT CACCAACGTC AAGCCGGTGG TCGACAATCC GGGCGGCAAC
CTGCCGGCCG GCAGCGTGAC CCGCATCAGC CCCGGAGACA ACTCCTACAC CGCCGACACG
CCGATCGTGG TCTACTACGC GCCGCAGCCG GTGGCGCCGA CCACGCCGAC CAGCTCGCAG
TCGCAGGGCT GCGACCCGAA CCAGGATCCG ACCTGTCAGC AGAACCCCAC GTCGACGGCG
TCCGGACCGG GCAACGGCCA GACCTCGTCG AACCCGATGC TGTGCGTCGT GGACCCGAAC
GCGCCGGGGT GCCCGAACGC TCCGACGACG TCCAAGAAGG GCGGGGGCGG CGGCGGCAAC
TAA
 
Protein sequence
MSGTYPGAEQ PRRLGGRYEL GAVLGRGGMA EVFMARDTRL GRTVAVKTLR ADLSRDPTFQ 
ARFRREAQSA ASLNHPAIVA IYDTGEDFEN GVSVPYIVME YADGSTLRDL LHSGRRLLPE
RALEITAGVL QALDYSHRNG IIHRDIKPAN IMLTRSGTVK VMDFGIARAM ADNGMTMTQT
AAVIGTAQYL SPEQAKGETV DARSDLYSTG CLMFELLTGR PPFVGDSPVA VAYQHVREEP
QPPSSYDPEV SPAIDAVVLK SLAKTADARY QSATEMRADI ERVLDGRPTE AQTAVLGAAN
MPTQRLDPRQ VGAAAAVGQT RAMPAVDTPT GYQSPAPRYE EGLDGPGGRP PGPPRRAEPR
RAPEPEKSGR TGYIILAIAG IAAVIAAILL AKSLLKSGGN ASSKAAPDFG IGVKTFPQAQ
QMLAQPDYTG FSLTGSGKDC PPGTDVHSGN AGTIIAQSPA AGAYGKPGPI TYCLSLGPQN
GKVPPKATLN GMNQDQLKAY LGGAHFDLAN PLITSQPDPK VLAGNIIDVI DAGNNNAVLD
GQQVPDVSKV QIGWIVSAGP SKIPLSTQGY IGQPYNSVVS QIQGLGFTNV KPVVDNPGGN
LPAGSVTRIS PGDNSYTADT PIVVYYAPQP VAPTTPTSSQ SQGCDPNQDP TCQQNPTSTA
SGPGNGQTSS NPMLCVVDPN APGCPNAPTT SKKGGGGGGN