Gene Caci_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0035 
Symbol 
ID8331360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp34710 
End bp36773 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content73% 
IMG OID644953202 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003110831 
Protein GI256389267 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTG TGCTCAGGTA CGCGATCCGC TCCCATGTCG GGCTGATCCG GGAGGGCAAC 
GAGGACTCCG GTTACGCCGG CCCGCGGCTG CTGGCGATCG CCGACGGCAT GGGCGGCGCC
GCCGCCGGTG AGCTGGCCAG CGCTGTCGTG ATGACGACGG TCTCGCGGCT GGACTCCCCC
GGCGGCGAGG ACCTGCTGTC CGGCACCGGG GAGATGCCCG TGATGGCGCC CGGCGGCGCC
GGTCCCGGCC AGGGCCAGCC TGCTCCCGGC GCCCCGGGCG GCGGTCCGGG CGGTCAAGGC
GGTCCCGGCG GCGTGCCGGA GAACGAGCAG ACCCTGCACA TCTCCCAGCA CGACATGGCC
GCCCGCGAGT CCGGCAACGC GCACTCGCCG GCCGACCCCG CCTTCGGCGA GCCCGACCTG
GCGCTGCTGG GCGGCGCGGT GGTGGCGGCC AACGAGCGGC TGCGCGCGAT CGTGGCCGAG
CGCCCGGAGC TGGAGGGCAT GGGCACCACG CTGACCGCGA TGCTGTGGTC CGGCGGCCGT
TTCGGCATGG TGCACGTCGG CGACTCCCGT GCCTACCGCC TGCGCGACGG CCTGCTGGAG
CAGATGACCG CCGACCACAC CTGGGTGCAG CGCCTAATCG ACGAGGGCCG GATCACCGAG
GAGGAGGCCG GCCACCACCC GCAGCGCTCC CTGCTGATGC GCGTCCTGGA CGGCCGTACG
CAGGTCGAGG CGGACATCGG CACCTTCGAC GCCTACCCCG GCGACCGCTA CCTGCTGTGC
TCGGACGGTC TGTCAGGATT CGTCTCCCAG GAGACCCTGG CTGAAACCCT GGCCGCCTAC
GCCGATCCGC AGCAGGCTGT CGACGCCCTG ATCGAGCTGG CTCTGCGCGC CGGCGGTCCG
GACAACATCA CCTGCATCGT CGCCGACACC CTCGACGACG GCACGATCCC CGGCGCCAGC
CCGAACGAGT CCACGCAGAT GCTGGGGTCG CTGACCCCGG TGGTGGTCGG CGCGGCCAGC
GAGGGCGTGG AGCAGCTGCC CCGGTTCAGC ACCCAGGGTT CCGGCGGGCC CGGTCCCGGT
CCGCAGCAGG ATGATTTCCC GCAGAACCAC CCGGCCGGCC GCGCCGCCCG GCTGCGTTCG
CGCCGCAACC AGAACCAGAA CTCGCAGAAC CAGAACGCCC AGAACCAGCA GCTGGCCGCC
GAGCAGCATC CCGGCGGACC GGTGACCACC GCGCAGCAGC AGTTCGACCC CTCCGCCCAG
ACCACTGAGC TGGACTCGGT GCCCGGGCAG CGAGGTCTGG TGCCCGGCGC GGAGAACCAG
CAGCCCGGGT CGCGGCGCAA TGCCGACGGC GGGTACGGCG GCGCTCCCGA CGGTGGTCCC
GGAGGTCCCG GCGGACCGGC TCCGGCCAAG CGGGGCAAGA AGGGCCTGAT CATCACCGGC
GCGGTGGTCG TGGTGCTGGC CGCGGCCGCG GGCGGGGCGT ACGTGTACAG CCAGGGGCAG
TACTACGTGA CGCCGTCCAC GGACAGCAAG CAGGTGCTGC TCTACCAGGG CTTGTCGCAG
GTGTCGTTCG CCTCGTCGCA GCAGACGATG TCCGAGGGTC CGCTGTGGAT CGCCTCGGTA
CCGCAGAGCA AGCGCGCCGA CCTGTTCAAG ACCGAGTCCT TCGGCTCCAA GGGCGCCGCG
CTGAGCTACC TGGAGCAGTA CCGGTCGGCC GCGAAGTCCT GTGCCGACTA CCGGCACAAC
CAGCTGGTCG TCCAGAGTCA CCCACAGCAG AGCGCCGTGA CCGGCAAGAC GGCGGGCACC
ACGGTGCCGG GGCAGAACCT CGCCCCGTCC GCGCCGCCCA CGTCGTCGAA GGCCGGCGCC
CCGCTGGCCA ACGGTCCGGC GAACACTGTG CAGAACCCCA CCGCGCCGAC CGGCGACCCC
GCCGGCACGA CCGCCCCGAC CGGCGGCGAG CAGGGGTCAC CGGAGCCGCA GAATCCCACG
TCGTCCCCCT CGGCGCCCGC GTCGCAGCCC GGTGACGACC CGCAGATGAA GGCGTACTGC
GCCGGAACAA CGGACGGTCC TTAG
 
Protein sequence
MALVLRYAIR SHVGLIREGN EDSGYAGPRL LAIADGMGGA AAGELASAVV MTTVSRLDSP 
GGEDLLSGTG EMPVMAPGGA GPGQGQPAPG APGGGPGGQG GPGGVPENEQ TLHISQHDMA
ARESGNAHSP ADPAFGEPDL ALLGGAVVAA NERLRAIVAE RPELEGMGTT LTAMLWSGGR
FGMVHVGDSR AYRLRDGLLE QMTADHTWVQ RLIDEGRITE EEAGHHPQRS LLMRVLDGRT
QVEADIGTFD AYPGDRYLLC SDGLSGFVSQ ETLAETLAAY ADPQQAVDAL IELALRAGGP
DNITCIVADT LDDGTIPGAS PNESTQMLGS LTPVVVGAAS EGVEQLPRFS TQGSGGPGPG
PQQDDFPQNH PAGRAARLRS RRNQNQNSQN QNAQNQQLAA EQHPGGPVTT AQQQFDPSAQ
TTELDSVPGQ RGLVPGAENQ QPGSRRNADG GYGGAPDGGP GGPGGPAPAK RGKKGLIITG
AVVVVLAAAA GGAYVYSQGQ YYVTPSTDSK QVLLYQGLSQ VSFASSQQTM SEGPLWIASV
PQSKRADLFK TESFGSKGAA LSYLEQYRSA AKSCADYRHN QLVVQSHPQQ SAVTGKTAGT
TVPGQNLAPS APPTSSKAGA PLANGPANTV QNPTAPTGDP AGTTAPTGGE QGSPEPQNPT
SSPSAPASQP GDDPQMKAYC AGTTDGP