Gene Caci_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0033 
Symbol 
ID8331358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp33113 
End bp34141 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID644953200 
ProductFHA domain containing protein 
Protein accessionYP_003110829 
Protein GI256389265 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGTCC TACAGCGGTT CGAGCGACGC ATCGAAGGGT TGGTCAACGG CGCCTTCGCC 
AAGGCATTCA AGTCCGAGGT CCAGCCGGTG GAGATCGCCT CCGCGCTGCA GCGCGAGTGC
GACGACCGGG CGGCCATAGT CAGCCAGGGA CGGACCATGG TGCCCAACGA CTTCACGGTC
GAGTTGGGCG GCGTGGACTA CGAGCGGCTG GCGACCTACG CCGGTCCCCT GGGCGCTGAA
CTCGCCGAAC TCGTCCGTGA GTACGGTGCG GAACAGCGCT ATATGTTCGT CGGACCGGTC
GAGGTGAAGT TCGCGCGTGC GGCCGATCTC GACACGGGGA TGTTCCGGAT CCAAAGTCAG
GCGTTGGCAG GAGTGGTGCC CGTGTCCTCG ATGCAAGGCG AGCCCCAGGG CTACGACCCC
TACGGCCAGC CTCCCCCCTA CCAGGGCGGC CCACAGGGCG GTCCGCAGGG CCCGGGTGGA
CCCCAGGGCC CAGGCGGTCC CCAGGGCCCC GGCGGCCTGC AGCCCGTGCC GCCGCCGAAC
CCCGTGCCGC AGCCCGCGCC GTGGGGATCC CCGCCGCCCC CGCAGGGGCA GGGCGGTCCC
CAGCCCGGCT GGGGCGCGCC GCCTCCCGGC CAGGGCGGCT ACGACCAGGG CGGGTACGAC
CCGTACGGCC AGCCGCCGCC GCAGCAGCCC GGCTGGGGTC CCCCCGGCCA GCAGCAGCAA
CAGCAGCAGT ACGCGCCGCC GCCGCAGTCC CAGACCCAAT GCTGGGTGGA GATCAACGGC
GCGCGGCACA TGCTGACCAA GCCGGTCACC ACCATGGGCC GCGGTACCGA CGTCGACCTG
CGGGTCGACG ACCCGTCGGT GTCGCGCCGG CACGCCGAGA TCCGGATCGG GACTCCGTCC
TACGTCTCGG ACCTGGGCTC CACCAACGGC ATCGTGGTCG ACAACCAGCA CGTCACGCAG
GCTCCCCTGC GCGACGGCTC GGTGATCCAC CTGGGCACGA CGACCATCAT CTTCCGGCAG
CAGGGCTAA
 
Protein sequence
MGVLQRFERR IEGLVNGAFA KAFKSEVQPV EIASALQREC DDRAAIVSQG RTMVPNDFTV 
ELGGVDYERL ATYAGPLGAE LAELVREYGA EQRYMFVGPV EVKFARAADL DTGMFRIQSQ
ALAGVVPVSS MQGEPQGYDP YGQPPPYQGG PQGGPQGPGG PQGPGGPQGP GGLQPVPPPN
PVPQPAPWGS PPPPQGQGGP QPGWGAPPPG QGGYDQGGYD PYGQPPPQQP GWGPPGQQQQ
QQQYAPPPQS QTQCWVEING ARHMLTKPVT TMGRGTDVDL RVDDPSVSRR HAEIRIGTPS
YVSDLGSTNG IVVDNQHVTQ APLRDGSVIH LGTTTIIFRQ QG