| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0029 |
|---|
| Symbol | |
|---|
| ID | 8331353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 29325 |
|---|
| End bp | 29969 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644953195 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_003110825 |
|---|
| Protein GI | 256389261 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCAA CCCTGCTGCC CTTCCTCATC GCCTGCACGG CGGTCGCCGC GGTCCCCGGA
CAGAGCACGG CGCTGATCAT CCGCCAGTCG ATCCGAGGCG GGAAGCGCGC CGGCTTCGCG
ACCGTGCTGG GCAACGAGAG CGGCGTGTTC GTCTGGGGCT GTGCCGCCGC CTTCGGCTTC
ACCGCGCTGC TCGCCGCCTC CGAGATCGCC TATGACGGGA TGCGTGTCGT CGGCGCCTGT
GTGCTGGTGT GGTTCGCGGT CCAGTCCTTC CGGTCCGCCC GCAGGATGAA GCAGGACGAA
GCCGCCGAGG AGACCGACGA ACTCGGCGGC GACGCGCGGA CCAAGGGCCC GCTGTGGTCC
TACCGCGCCG GGCTGCTGAC GAACCTGGCG AATCCGAAGG CGGCGATCTT CGCGATGTCC
TTCCTGCCGC AGTTCGTCCC GGCGCACGCC CCGAAGCTTC CGACGATGGT CCTGCTGGCC
GCGACCTGGG CCGTATACGA GGTCTTCTAC TACTCGCTCT ACGTCTGGTG CGTCCAGCGG
CTGCGCGCGT TCTTCAGCCG GCGCGAGGTC CGCCGCCGCA TGGAGCAGAT CTCCGGCACG
GTCATGCTGG GCCTGGCCGT CCGGATGGTC GTCGAGAACA GCTGA
|
|---|
| Protein sequence | MLATLLPFLI ACTAVAAVPG QSTALIIRQS IRGGKRAGFA TVLGNESGVF VWGCAAAFGF
TALLAASEIA YDGMRVVGAC VLVWFAVQSF RSARRMKQDE AAEETDELGG DARTKGPLWS
YRAGLLTNLA NPKAAIFAMS FLPQFVPAHA PKLPTMVLLA ATWAVYEVFY YSLYVWCVQR
LRAFFSRREV RRRMEQISGT VMLGLAVRMV VENS
|
|---|
| |