Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0027 |
Symbol | |
ID | 8331351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 28115 |
End bp | 28855 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644953193 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003110823 |
Protein GI | 256389259 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC ACGTGGAATT CCAGCGCCTG CACAACTTCC GTGACCTCGG CGGCTATCCG GCCGGCGCCG GTCGCGCGAC GAAGTGGGGC GTGCTGTACC GGTCGGACAA CCTGCGGAAG CTGAACGAGT CCGATGATGT CGAGCGCTTC CGTGCGCTGG ACGTCCACAC GGTCGTCGAT CTGCGGTACC CGTGGGAGAT CGAGCAGTCC GGCCGGGTTC CGGACTTCCC GGGACTGCGC TACGTCAACC TGAGCATCGA GCACCAGCCG TACGACCAGG GTGCGCTGGG AGACGACTTC GATCCGTGGC GCTTCCTTGC GGATCGCTAT ATGGAGGTCG CGCAGGACGG CGGTAAGGAG ATCCGCGGAG TCCTGGACGT CATCGCCGAT CCGGAGTCCG GGACGACGGT CTTCCACTGC GCTTCCGGCA AGGACCGGAC CGGCATCATC GCCATGCTGG TCCTCAGCTT GATCGGGGTA TCTGAGGACG ACGTAGTAGC CGACTTCGCT CTGACGGAGT TGGCGACGGA GCGGCTGATC GCGGACTGGA AGGCTTTCTA TCCCGATCGC GAACTCACAT GGTCCGCGTA TGCGCGCGCT CCTAAGGAAC CGATGGAGCT GTTCATCGCT GATCTGAAGT CCCGCTACGG CTCTGTAGAG GGGTACGCAG AACAGGAACT CGGCGTCGAC GAGGCTTTGG TCGCCGCGTT GAAGGCGAAG CTAGTCGACG TCGAGGGTTA G
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Protein sequence | MTRHVEFQRL HNFRDLGGYP AGAGRATKWG VLYRSDNLRK LNESDDVERF RALDVHTVVD LRYPWEIEQS GRVPDFPGLR YVNLSIEHQP YDQGALGDDF DPWRFLADRY MEVAQDGGKE IRGVLDVIAD PESGTTVFHC ASGKDRTGII AMLVLSLIGV SEDDVVADFA LTELATERLI ADWKAFYPDR ELTWSAYARA PKEPMELFIA DLKSRYGSVE GYAEQELGVD EALVAALKAK LVDVEG
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