Gene Caci_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0027 
Symbol 
ID8331351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp28115 
End bp28855 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID644953193 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003110823 
Protein GI256389259 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC ACGTGGAATT CCAGCGCCTG CACAACTTCC GTGACCTCGG CGGCTATCCG 
GCCGGCGCCG GTCGCGCGAC GAAGTGGGGC GTGCTGTACC GGTCGGACAA CCTGCGGAAG
CTGAACGAGT CCGATGATGT CGAGCGCTTC CGTGCGCTGG ACGTCCACAC GGTCGTCGAT
CTGCGGTACC CGTGGGAGAT CGAGCAGTCC GGCCGGGTTC CGGACTTCCC GGGACTGCGC
TACGTCAACC TGAGCATCGA GCACCAGCCG TACGACCAGG GTGCGCTGGG AGACGACTTC
GATCCGTGGC GCTTCCTTGC GGATCGCTAT ATGGAGGTCG CGCAGGACGG CGGTAAGGAG
ATCCGCGGAG TCCTGGACGT CATCGCCGAT CCGGAGTCCG GGACGACGGT CTTCCACTGC
GCTTCCGGCA AGGACCGGAC CGGCATCATC GCCATGCTGG TCCTCAGCTT GATCGGGGTA
TCTGAGGACG ACGTAGTAGC CGACTTCGCT CTGACGGAGT TGGCGACGGA GCGGCTGATC
GCGGACTGGA AGGCTTTCTA TCCCGATCGC GAACTCACAT GGTCCGCGTA TGCGCGCGCT
CCTAAGGAAC CGATGGAGCT GTTCATCGCT GATCTGAAGT CCCGCTACGG CTCTGTAGAG
GGGTACGCAG AACAGGAACT CGGCGTCGAC GAGGCTTTGG TCGCCGCGTT GAAGGCGAAG
CTAGTCGACG TCGAGGGTTA G
 
Protein sequence
MTRHVEFQRL HNFRDLGGYP AGAGRATKWG VLYRSDNLRK LNESDDVERF RALDVHTVVD 
LRYPWEIEQS GRVPDFPGLR YVNLSIEHQP YDQGALGDDF DPWRFLADRY MEVAQDGGKE
IRGVLDVIAD PESGTTVFHC ASGKDRTGII AMLVLSLIGV SEDDVVADFA LTELATERLI
ADWKAFYPDR ELTWSAYARA PKEPMELFIA DLKSRYGSVE GYAEQELGVD EALVAALKAK
LVDVEG