Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0022 |
Symbol | |
ID | 8331346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 23568 |
End bp | 24164 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953188 |
Product | protein of unknown function UPF0016 |
Protein accession | YP_003110818 |
Protein GI | 256389254 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGA CCGCCCTGCT GACCGCGTTC GGCGTGGTGT TCCTGGCCGA ACTGCCGGAC AAGACCGCGA TCGCGTCCCT GATCCTGGGC GCCCGGTACC GGCCGTCCTG GGTGTTCGCC GGGGTGGCGG CGGCCTTCGT GGTGCACGTC GCGCTCGCCG TCGCGGCCGG CTCGCTGCTC ACCCTGGTCC CGCGGCGTCC GCTGGAGGCC ATCGTCGCGG TGCTGTTCCT CGGCGGCGCG GTGCTGATGC TGCGCAGCCA CGGCCGCGAG GCCGGTGAGG AAGAGGCCGA AGAAGCCCCG GACCTCGGCG ACGACGCCGG TTTCGGCAAG GTGGCCGGGA CCGCGTTCGG GGTGATCATG GTCGCCGAGT TCGGGGACCT GACACAGATC GTGACCGCGA ACCTGGCAGC GAAGTTCGCC GATCCGCTCG CCGTCGGCCT CGGCGCCACC CTGGGTTTGT GGGCGGTCGG CGGACTGGCC ATCGTCGGCG GGCGCAGTCT GCTCAAGGTG CTGCCGCTGC ACCTGATCGT GCGGCTGGCG GCGCTGGTGA TGGTCGTGCT GGCCGGCGTC AGCCTGTGGC AGGCCGTCGC CGGCTGA
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Protein sequence | MSLTALLTAF GVVFLAELPD KTAIASLILG ARYRPSWVFA GVAAAFVVHV ALAVAAGSLL TLVPRRPLEA IVAVLFLGGA VLMLRSHGRE AGEEEAEEAP DLGDDAGFGK VAGTAFGVIM VAEFGDLTQI VTANLAAKFA DPLAVGLGAT LGLWAVGGLA IVGGRSLLKV LPLHLIVRLA ALVMVVLAGV SLWQAVAG
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