Gene Caci_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0017 
Symbol 
ID8331341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp19091 
End bp19840 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID644953183 
Producthypothetical protein 
Protein accessionYP_003110813 
Protein GI256389249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTG ATCCGCTTCC CGACGCCCGA GCCCTGGTGC GCGAACGTTA TCCCCAGGCT 
GTGTACGCCG TGCTGGCCGG CAGTGTCCTG ACCGCGCACC GAACGCCCGG CTCGGATCTC
GACATCGTCG TGGCACTCCC ACCCGGCGAT CCGCTGGCGC CGCGCCGCGA GTCGCTCGTC
TTCCGCGACT GGCCGGTCGA GCTGTTCGTG CACGACGAGC AGACCCTCGA CCAGTGGCTG
GCCAAGGAGT ATCGCGAGCG CAAGCCGAGC CTGTACCGGA TGGTCGGCCG CGGAACACCG
ATCGTCGGCG ACCCGGCCGA CCGGCAGGCA TATTGCCGCG CGGTCCTGGA CGCCGGGCCG
GATCCGATGG GACCGGCACA GCTGGAAGCG GCGCGCTACG GCCTCACCGA TCTGCTCGAC
GATCTCTTCC ACGCCGGCGA TCCCGGCGAG CGCCAGGTCA TCGCGGCCAC GCTGTGGACC
GCCGCCGGGC ATCACGCGCT GGTCGCCGGA AACCGCTGGG ACGGCACCGG CAAATGGCTG
CTCCGCGAGT TGCGCGACCA CGACCCGGAC CTGGCCGACC GCTGGCTGGC CGCCCAGCAC
GACGCGGCCG CGGTCGAGGC GTTCGCCCGC GACGTCCTGG ACCGTCTCGG CGGACCGCTT
TTCGACGGCT ACCAGGCTGT CGCGCCGCGA GCGGAGACCA CGAAGACCAC GAAGACCACG
AAGACCACAG AGTTCACCCG GTCCACCTAG
 
Protein sequence
MDRDPLPDAR ALVRERYPQA VYAVLAGSVL TAHRTPGSDL DIVVALPPGD PLAPRRESLV 
FRDWPVELFV HDEQTLDQWL AKEYRERKPS LYRMVGRGTP IVGDPADRQA YCRAVLDAGP
DPMGPAQLEA ARYGLTDLLD DLFHAGDPGE RQVIAATLWT AAGHHALVAG NRWDGTGKWL
LRELRDHDPD LADRWLAAQH DAAAVEAFAR DVLDRLGGPL FDGYQAVAPR AETTKTTKTT
KTTEFTRST