Gene Caci_0008 details

Gene Information

• Locus tag: Caci_0008
• ID: 8331331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Catenulispora acidiphila DSM 44928
• Kingdom: Bacteria
• Replicon accession: NC_013131
• Strand: +
• Start bp: 12855
• End bp: 13391
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644953173
• Product: hypothetical protein
• Protein accession: YP_003110804
• Protein GI: 256389240

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.368186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.576466
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAACTG TGGCGTATCA GCAATCGGAT TCCGCTCAAG GCCAGGCGGG CACCCGCCAG 
CAGGCCGGCG GCGGCTGGGG CGCGCGCCCG AACAGCCCGG CCGGAGCCCC CACAGGCGCA 
CCCCGCTACC AGCAGCAGCA GGCACCCGCC GCCGCCCCCC GCGGCCGCAA AGCCCGCCTG 
CGCGTAGCGA AGGTCGACCC CTGGTCGGTG ATGAAGACGA CCTTCGTCCT GTCGATCGCC 
TTCGCCGTCG TCTCCGTAGT AGCCGCGGCC CTCCTGTGGT CAGCCCTCAA CGCCCTCGGC 
GTCTTCGACT CGATCAACCA CACCCTGGCC TCAGTAGCCC CCGCGAACCA GCCCAACAGC 
GTCACCCTGA CCTCGGTCCT CTCCTTCGGC AAGGTCCTCA GCTTCACAGC CCTCGTGAGC 
GTAGTGAACA TCGTCCTGTT CACCGCCCTA GCCACCCTCG CCGCCTACCT CTACAACATG 
TGCTCCTCCC TCGTAGGCGG CATAGAGGTC ACCCTCGCCG ACGACACCGC CTCCTGA 

 

Protein sequence

MGTVAYQQSD SAQGQAGTRQ QAGGGWGARP NSPAGAPTGA PRYQQQQAPA AAPRGRKARL 
RVAKVDPWSV MKTTFVLSIA FAVVSVVAAA LLWSALNALG VFDSINHTLA SVAPANQPNS 
VTLTSVLSFG KVLSFTALVS VVNIVLFTAL ATLAAYLYNM CSSLVGGIEV TLADDTAS