Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0005 |
Symbol | |
ID | 8331328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6140 |
End bp | 6658 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953170 |
Product | protein of unknown function DUF721 |
Protein accession | YP_003110801 |
Protein GI | 256389237 |
COG category | [R] General function prediction only |
COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.44696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.799003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCAC AGCCTGTGGA CAACGGTTCC GGCGCCGAGG GCGGTGACCC TCAAGACTCT GGCGTCGACC TGGCCCGCGC CGCTTTAGCC GCCGCACGCG CCCGCGGCAA GGACAACGGC GCCGGGTGGA GCGGCAACCG CCGGCGTAAC AGCAACTCCG GCCAGCGCTC GGGATCCGGT CCCGACGAAC GCGATCCGCA GCTGCTGTCC TCGGCGATCC CCAGGATGAT CGAGGCCAGG GGCTGGAGTG TGCCGGCGGC GGTCGGCGGC GTGATGGGCC GCTGGGGCGA GATCGTGGGC AGCCACATCT CGGCGCACTG CACCCCGGTG GAGTTCCACG ACGGCGTCCT CATGGTCCGC ACCGATTCCG CGGCCTGGGC CACCGAGCTG CGCATGCTGG CGCCGCAGCT GCTCGCGAAG CTCAACGCCG AGCTGGGGAC GTCCCGCGCG GCCCACGGCG GCCGGGACGC CGCCGGCGCC ATCGCGACCC TGAAAGTGGT CGGACCCGGC GGTCGCTGA
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Protein sequence | MNPQPVDNGS GAEGGDPQDS GVDLARAALA AARARGKDNG AGWSGNRRRN SNSGQRSGSG PDERDPQLLS SAIPRMIEAR GWSVPAAVGG VMGRWGEIVG SHISAHCTPV EFHDGVLMVR TDSAAWATEL RMLAPQLLAK LNAELGTSRA AHGGRDAAGA IATLKVVGPG GR
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