Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0004 |
Symbol | |
ID | 8331327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4998 |
End bp | 6143 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953169 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_003110800 |
Protein GI | 256389236 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.321306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.933031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGGTCA CGCATCTGTC CCTGGCGGAT TTCCGCTCCT ACGCCTCCCT CGACGTCGCG CTCGGGGGAG GCGTCACGGC GTTCGTCGGG CCCAACGGGC AGGGGAAGAC CAACCTGGTC GAGGCGATCG GCTACATCGC CACGCTCGAC AGCCACCGCG TGGCCACCGA CCAGCCGCTC GTGCGCTTCG GCGCGCCGCG CGCCATAGTG CGCGCGAACG TGGAGCGCGA AGGCCGTACA CAGCTTGTGG AAATCGAGCT GAACCCGGGC GGGGCGAACC GCGCGCGGCT CAACCGCAAC CCGGTTCCGC GCCCGCGCGA GGTGCTCGGC GTGCTGCGGA CCGTGCTGTT CGCCCCAGAA GACCTCGCCT TGGTGAAGGG CGATCCGGGG GAGCGCCGCC GGTTCCTGGA CGAACTGCTC GTCGCCCGCT GGCCGCGGTT CGCCGGGGTC CGTGCCGACT ACGACAGAGT GCTGAAGCAG CGGAACACTT TGCTGCGCAC GGCCGCGATG GCGCGGCGTA ACAAGGCCTC CGGTCCCAAC ATCTCGACGC TCGACGCCTG GGACCACCAC CTGGCGCTGG CCGGCGCCGA ACTGGTCGCC GCGCGCCTGG CGCTGATCTC GGCGTTGTCC CCCCTTGTGG ACAAGTGTTA CGTCGAGATC GCCGAGGGCG GCCAGACGCG CATCGGCTAC CGCTCGACGA TCTCCGCCGA GCCCGATCCG ACCGCCGCGG CCCTGACAGA ACAGTTCATG ACCGCCCTCG GCGAGGCCCG CGCTAACGAA TTGGACCGCG GCATCACCCT GGTCGGTCCG CACCGCGACG AAATGGTGCT GGAGCTGACC TCCTCTTCCG GAGACAACAT GCCGGCGCGC GGCTACGCCA GCCACGGCGA ATCCTGGTCG TACGCGCTGG CATTACGTTT GGCCGCATAC GACCTGCTGC GCTCCGACGG GTCCGACGGC GGCGAGCCGG TCCTGATCCT CGACGACGTC TTCGCCGAAC TCGACGCCAA GCGCCGCCGC CGGCTGGCCG AGCGTGTCTC GGGCGCCGAC CAGGTGCTCA TCACCGCGGC CGTGGACGCC GACGTGCCGG AGCAGCTGAT CGGCCAGAAG TTCACGGTCG CCGACGGACA GGTGAGCGCG GCGTGA
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Protein sequence | MRVTHLSLAD FRSYASLDVA LGGGVTAFVG PNGQGKTNLV EAIGYIATLD SHRVATDQPL VRFGAPRAIV RANVEREGRT QLVEIELNPG GANRARLNRN PVPRPREVLG VLRTVLFAPE DLALVKGDPG ERRRFLDELL VARWPRFAGV RADYDRVLKQ RNTLLRTAAM ARRNKASGPN ISTLDAWDHH LALAGAELVA ARLALISALS PLVDKCYVEI AEGGQTRIGY RSTISAEPDP TAAALTEQFM TALGEARANE LDRGITLVGP HRDEMVLELT SSSGDNMPAR GYASHGESWS YALALRLAAY DLLRSDGSDG GEPVLILDDV FAELDAKRRR RLAERVSGAD QVLITAAVDA DVPEQLIGQK FTVADGQVSA A
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