| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_R0043 |
|---|
| Symbol | |
|---|
| ID | 8323629 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1613802 |
|---|
| End bp | 1616794 |
|---|
| Gene Length | 2993 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 644952676 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCAAGGTACG AAGGGCCAAC GGTGAATGCC TTGGCGCCTG GAGCCGATGA AGGACGTGGG
CGACTGCGAT AAGCCATGGG GAGCTGTCGA CCAAGCGTTG ATCCATGGAT GTCCGAATGG
GGAAACCCGG CGTGGGGAAT GCCACGTCAC CCCTGCCTGA ACACATAGGG CAGGAGGAGG
GAACGGGGGG AATTGAAACA TCTCAGTACC CCCAGGAGAG GAAAGCAACC GCGACTCCCC
TAGTAGCGGC GAGCGAACGG GGATCAGCCC AAACCCGGGC GGTGTCAAGC CTGGCGGCGT
TGCCGTCCGG GGGTAGCGGG AGCGACGAGG AGGGTGCGCC AGCCCCTCCA GGGAGTTACC
AAGCAGCGCG TGAGCCGAAG CGACTGGAAC GTCGCGCCAC AGGGGGTGAC AGCCCCGTAG
GCGAAGCGAG CTGCCTCCCC GTCGCCACCC AAGTAGCGCG GGATCCGGGA AAGCCCGTGT
GAATCTGCGA GGACCACCTC GTAAGGCTAA GTACTCCCAG GCGACCGATA GCGAACTAGT
ACCGTGAGGG AAAGGTGAAA AGCACCCCGA GAGGGGAGTG AAACAGATCC TGAAACCGTT
GGTCTACAAG CAGTCAGAGC CCGCGAGGGC GATGGCGTGC CTTTTGAAGA ATGAGCCAGC
GAGTTACCGT AGGTAGCGAG GTTAACCCAT GCGTGGGGGA GCCGAAGCGA AAGCGAGTCT
GAACAGGGCG ACGAGAGTTG CCTGCGGTAG ACCCGAAGCC GAGTGATCTA TCCATGGGCA
GGCTGAAGCG GGGGTAAGAT CCCGTGGAGG GCCGAACCCA CCCTGGTTGA AAACAGGGGG
GATGACCTGT GGATAGGGGT GAAAGGCCAA TCAAACTCGG TGATAGCTGG TTCTCCCCGA
AATGCATTGA GGTGCAGCGT CAGGTGTTCA GCATCGGAGG TAGAGCACTG GATGGGCTAT
GGGGGCCCAC AGCCTTACTG ATCCCAACCA AACTCCGAAT GCCGATGCTC CAGAGCCTGG
CAGTGAGACC ACGGGGGATG AGCTTCGTGG TCGAGAGGGA AACAGCCCAG ACCGCCAGCT
AAGGTCCCAA AGTACCGGCT AAGTGGAAAA CGATGTGGAA CCGCCCAGAC AGCCAGGAGG
TTGGCTTAGA AGCAGCCACC CTTCAAAGAG TGCGTAATAG CTCACTGGTC GAGTGGTTCC
GCGCGGATAA TGTAACGGGG CTAAGCCGGT CACCGAAGCT GCGGGTCCGG TGACGTACGT
CACCGGGCGG TAGGGGAGCG TCGAGCGTGC CGTGAAGGTG AGGCGTGAGC CGAGCTGGAG
CGCGCTCGAG TGAGAATGCT GGCATGAGTA GCGAACGAGG GGTGAGAATC CCCTCCGCCG
AATGCCTCAG GGTTCCTGGG CAAGGCTCGT CCACCCAGGG TGAGTCGGGA GCTAAGGCGA
GGCCGCAAGG CGTAGTCGAT GCACAACCGG TTCATATTCC GGTACCGCCC CGATCGCGTT
TGAGCGATGG AGGGACGCAG GAGGGTAGGT GATCCCAGGC GTTGGTCGTT CCTGGGGAAA
GCGTGTAGGG CGAGGGCCAG GCAAATCCGG ACCTCACGAA GCCTGAGACG CGACTCCGAG
CCCACTTCGG GCGAAGTCAC TGATCCCATG CTGCCGAGAA AAGCTTCTAG CGAGTGATCG
AGGCGCCCGT ACCCCAAACC GACACAGGTA GGCAGGTAGA GAATACCAAG GCGAGCGGGA
GAACTGTGGT TAAGGAACTC GGCAAATTAC TTCCGTAACT TCGGGATAAG GAAGACCTCG
GTAGGGTGAA GGGCCTCGCG CCCGGAGCCC GAGGGGGTGT CACAAACCAG GGGGAAGCGA
CTGTTTACTA AAAACACAGC AGCGTGCCAA GTCGCCAAGA CGATGTATAC GCTGTGACGC
CTGCCCGGTG CCGGAAGGTT ACGGGGAGGG GTTAGCCCGC AAGGGCGAAG CTCTGAACCT
AAGCCCCGGT AAACGGCCGC CGTAACTATA ACGGTGCTAA GGTAGCGAAA TTCCTTGTCG
GGTAAGTTCC GACCCGCACG AATGGCGTAA CGACTTCCCC ACTGTCTCAA CCACAGACCC
GGCGAAATTG AAGTACGAGT AAAGATGCTC GTTAGCTGCA TCAGGACGGA AAGACCCCGT
GGACCTTTAC TGTAGCTTGA TGTTGAGCTT TGGTTCCGAT TGTGTAGGAT AGGTGGGAGC
CTGCGAAAGG GGAGCGCTAG CTTCCCTGGA GGCGTCCTTG AAATACCACC CTGTCGGTGC
TGGAGCTCTA ACCGCGACCC GTGAATCCGG GTCCGGGACC GCGTCAGGTG GGCAGTTTGA
CTGGGGCGGT CGCCTCCTAA AGAGTAACGG AGGCGCCCAA AGGTTCCCTC AGACTGGTTG
GCAATCAGTC GTCGAGTGCA ATGGCACAAG GGAGCTTGAC TGCGAGACCC ACATGTCGAG
CAGGTGCGAA AGCAGGGCAT AGTGATCCGG CGGTCGCATG TGGAAGCGCC GTCGCTCAAC
GGATAAAAGG TACCCCGGGG ATAACAGGCT CATCTTGCCC AAGAGTCCAT ATCGACGGCA
AGGTTTGGCA CCTCGATGTC GGCTCGTCGC ATCCTGGGGC TGAAGTCGGT CCCAAGGGTT
GGGCTGTTCG CCCATTAAAG CGGTACGCGA GCTGGGTTTA GAACGTCGTG AGACAGTTCG
GTCCCTATCC GATGCAGCCG TAGGAAACTT GAGAGAGGCT GTCCCTAGTA CGAGAGGACC
GGGACGGACG TAGCGCTCGT GTGCCAGTTG TCCTGCCAAG GGCACGGCTG GTTAGCGACC
TACGGAAGGG ATAAGCGCTG AAAGCATATA AGCGCGAAGC TCGTCTCAAG ATGAGGTTTC
CCACAGGGTC AACCTGGTAA GGCCCGTGGT AGACGACCAC GTTGATAGGC CGGAGGTGTA
CGCACGGCAA CGTGTTCAGC CGACCGGTAC TAATCGGCCG AGGACTTGGA GCT
|
|---|
| Protein sequence | |
|---|
| |