Gene Afer_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_2034 
Symbol 
ID8324137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2155430 
End bp2156275 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID644953161 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_003110608 
Protein GI256372784 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTGGA TCGAGACGAC AGGACGAACT GTCGAAGAGG CACGTGAGCA AGCACTGGAT 
GTGCTCGGCG TGGAAGACGC CGAGGTCGAG TTCGAGGTCC TCGACGAAGG GCGAGCAAGT
TTTCTCGGGT TCGGACGGAG AGAGGCACGG GTTCGAGCTC GTCTTCGGCC GAAGCTTCCG
ATGCCAAAGC GTGATCGGCG TCGTGGACGA CGAAATCGGG CCGTTGACGC GCGGCCCGGG
GCTGGTACCA GGCGAGACGA AACAGAGGAT GCTCCGATGA ACGACGAACA ACAGACGGCC
GAAGCCCCGG CGGCAGAGGG AACTCCTCCC CTCTCGCGTG TGGAGCTTGC CGCGCGAGCA
CAGGCCTTCT TGGCCGGGCT CATGCAGGAG TTCGGGCTGA CGGGCGAGGT TCGCGTCAGC
AACCTCGATG ACGAAGAGAT GAGTCTCGAC ATCGAGGGCG ATGGGCTCGG GGTCCTCGTG
GGGCCACGGG CGAGTGTCCT GAACGCGATT CAAGAGCTGA CGCGCAGTGT GTTGCAGGCC
ATCGCCGGCG AGGGTGTGGG ACGGGTGGCG GTCGACGTCG CCGGCTATCG CGAGCGACGG
CGGGTCGCGC TCGAGCGCTT CGCGCGAGAG CAGGCAGAGG TCGCACTGAC GACTGGCGAA
GAGCGCGTGC TCGAGCCGAT GAGCGCCGCA GATCGGAAGG TGATCCATGA CGTGGTGGCC
GAGATCGACG GTGTCGGGAC GCGTTCAGAG GGTGAGGAAC CGGATCGCTA CGTTGTGATC
TTCCGTGTCG GGGTAGCACC ATCGGCCGCC GAGTCCGTCG ATGCTGCCGG TCGAGCAGTG
GATTGA
 
Protein sequence
MDWIETTGRT VEEAREQALD VLGVEDAEVE FEVLDEGRAS FLGFGRREAR VRARLRPKLP 
MPKRDRRRGR RNRAVDARPG AGTRRDETED APMNDEQQTA EAPAAEGTPP LSRVELAARA
QAFLAGLMQE FGLTGEVRVS NLDDEEMSLD IEGDGLGVLV GPRASVLNAI QELTRSVLQA
IAGEGVGRVA VDVAGYRERR RVALERFARE QAEVALTTGE ERVLEPMSAA DRKVIHDVVA
EIDGVGTRSE GEEPDRYVVI FRVGVAPSAA ESVDAAGRAV D