| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2027 |
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| Symbol | |
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| ID | 8324130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 2144096 |
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| End bp | 2145616 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953154 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003110601 |
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| Protein GI | 256372777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.828592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCTCT GTGCGGTCAT GTCCCTGACG TTCCTCGACA CCACGATCGT CGCGGTTGCG
CTCGCCAGCG TGCAGACCAG CCTGCACGCT GGCGTGGCCC AGTTGCAATG GGTGATCGGT
GGCTATGCGC TCGCCTTCGG CGCGCTGATG CTGCCCTTCG GAGCGCTCGG GGATCGCTTC
GGTCGGCGGC GCGCGATGCT CGTCGGTCTG GCACTCTTTG CTGTTGGATC TGCGACCGCT
GCGCTTGCCC ACTCACCCGC TCAGTTGATC GCCGCTCGCG TGGTCATGGG TGTCGGCGCT
GCCGCCAGCG AGCCTGGGAC GCTCTCGATC ATTCGGCAGC TCTACACCGA GCCCGGCAGC
CGCGCACGAG CACTCGGCGT GTGGTCCGCA GTAGCGGCAC TCGCGCTCGC CGTCGGACCG
GTCATCGGGG GAGTACTCGT CGGGATTGGA GGCTGGCCAG CGATCTTCTG GTTCAATGTC
GCCGCGAGCG TCGTCGTCAT CGTGGTCACG GCCATCGTCA TCCCCGAGAG TACGGACCCC
GGTGTCGGGC GCATCGACTG GGGTGGAGCA GCACTCGGCC TGATCGCCAT CGGTGGGGCG
CTCTTCGGCG TCATCCAGGG CGAGGCACGC GGCTATGGCA ACCCTCTCAT CGTGGCGGTC
TTCGTCGTGG CCGCCGTCGG TTTGGCCGTC TTCAGCGTCC TTGAGGCACA CGTGCCGAAC
CCGATGCTCG ACCTGCACTA CCTTCGTCGA CCAGGCTTCT CCGGGTCGCT GGTGCTGGCG
TTCAGCGTGT ACTTCTCGAT CTTCGCGATC TTCTTCTTCA CTGCCCTGTA TCTGCAGATC
GTCGAGGGCT ACAGCGGCTA CCGCATCGCG TCGGTGTTCC TCCCGATGGC GCTCGCCATG
ATCCTGACCT CGCTGGCCAC CGGACGGTGG GTAGCGCGCA TTGGCGTCGG CATGCCCATC
GCACTGGGAT CACTGCTCGC CGGCCTCGGC GTGCTCGGTG CCGACGTCGG CCTCAGCGGC
AGCACGCATC CATTGGTGCT CGCCCTCTCC CTCACCGTGG CTGGACTCGG CTTCGGCACC
ACCGTCGTTC CGGTCACGAG TATCGCGCTC GCCGTCGTAC CGCAGCAGCA CTCAGGCATG
GCCGCTGCGT CCACAAACAC CGCACGAGCC CTCGGCGTGA TCGCGAGCGT CTCGGTTCTC
GGCTCGTACC TCAATGCCCA GCTCACCAGT GGCCTTGGTA CCAAGCTCGC CCGACTCGGG
GTCCCACCGG TCTTCCGCCA CGTGGTGATC AGCGCGGTCG AGACGGGCGG CGTCCCCGGT
GGCTCGAGCA TTGCGGCCGA CACCAAAACG TTCGGGCCTC TCGTCGCCAA GGTCGTCACA
GCTGCCTACG GAGCATTTCA TCGAGGTCTC ACCATCTCAT TGATCATCGC TGGCGCGCTC
ATCATCGTCT CGGGCGTCTT GAGCGCCGTC GCGGTGCGAG GTGCGCGGAC GCGCCCCGAC
GGCGAGACGT CCCAGGCGTA G
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| Protein sequence | MVLCAVMSLT FLDTTIVAVA LASVQTSLHA GVAQLQWVIG GYALAFGALM LPFGALGDRF
GRRRAMLVGL ALFAVGSATA ALAHSPAQLI AARVVMGVGA AASEPGTLSI IRQLYTEPGS
RARALGVWSA VAALALAVGP VIGGVLVGIG GWPAIFWFNV AASVVVIVVT AIVIPESTDP
GVGRIDWGGA ALGLIAIGGA LFGVIQGEAR GYGNPLIVAV FVVAAVGLAV FSVLEAHVPN
PMLDLHYLRR PGFSGSLVLA FSVYFSIFAI FFFTALYLQI VEGYSGYRIA SVFLPMALAM
ILTSLATGRW VARIGVGMPI ALGSLLAGLG VLGADVGLSG STHPLVLALS LTVAGLGFGT
TVVPVTSIAL AVVPQQHSGM AAASTNTARA LGVIASVSVL GSYLNAQLTS GLGTKLARLG
VPPVFRHVVI SAVETGGVPG GSSIAADTKT FGPLVAKVVT AAYGAFHRGL TISLIIAGAL
IIVSGVLSAV AVRGARTRPD GETSQA
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