| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2023 |
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| Symbol | |
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| ID | 8324126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2139339 |
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| End bp | 2140523 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953150 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003110597 |
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| Protein GI | 256372773 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.161113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGATC GCAACCAGGA CCAAGGGCGT GGGCCACTTG CTGGCCTCCT GGTCGCCGAC
TTCTCGCGGG TGCTCGCCGG TCCCTACTGC ACGATGCTCC TCGGCGACCT CGGTGCCACG
GTGATCAAGG TGGAGAGCCC GACCGGCGAC GAGACTCGTT TTTGGAAGCC TCCGGTCACC
GCCGACGGGA CGTCCACGTA CTACCTTGCG ATCAACCGCA ACAAGCGGTC GGTCGTTCTC
GACCTCAAGG ACGATGACGA TCGTGCCCTC GCACAGGAAC TCGCACGTCG TGCTGATGTC
GTCGTCGAGA ACTTCAAGCC TGGTGGATTG GCACGCTTCG GCCTCGCCTA CGAGGACGTC
GCGGCCGAGA ACCCCGCGGT CGTCTACGCG TCGATCAGCG GCTTTGGCAC GAGTCAGGGT
GGGCGGGAAC TGCCCGGCTA TGACCTGGTG GTCCAGGCGA TGTCTGGGTT GATGAGCTTG
ACGGGAGAGC CTGACGGCCC AGCGCTGCGT TCGGGCATTT CGGTGTTCGA CGTCATGACA
GGACTGCACA CGGCGATCGC GATACTGGCC GCCCTCCATC ACCGTACGTT GACCGGCGAG
GGCCAGCACC TCGAGGCGAG CCTCTTCGCC TCGGCGTTGT CCGGCATGGT GAACCAGACC
AGCGCCTACG TCGCGGGCGG CGTGGTGCCG AGCCGCATGG GCAACGCGCA TCCGAGTCTG
TTCCCCTATG AGCCGTTCCC GACGGCTGAG GGTGAACTCG TCGTCACGAT CGGCAACGAC
GTCCAGTTCG CTCGTCTCTG TGACGTCCTT GGCGTGCCTG AACTTGCCCA GGATCCGCGC
TTTGCCCACC CCGACGACCG CACCGCTCAT CGAGAACAGC TGCGGCCACT GCTTGAGCAC
CAACTCCGTC ACGACAGTGC GGACGCGTGG TTTGAGCGGC TCACCGCCGT CGGCGTCCCG
TGCGGACCGA TCAACACCGT GGCCGAGGGC GTTGCCTTCG CCGAGCGCAT CGGACTCGAG
CCTGTCATCG TGGTGGGGGA GGGGTCGCGC GCCGTACGCC AGACGCGCCA CCCGGTGATC
TATTCGAAGA CGGCGCCACG CTATGACCTT CCTCCGCCGG CCCATGACGA GCACGGCGAC
GAGATCCGGG ACTGGCTCCA GCGCCCGATG GAGGAGGACC GTTGA
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| Protein sequence | MDDRNQDQGR GPLAGLLVAD FSRVLAGPYC TMLLGDLGAT VIKVESPTGD ETRFWKPPVT
ADGTSTYYLA INRNKRSVVL DLKDDDDRAL AQELARRADV VVENFKPGGL ARFGLAYEDV
AAENPAVVYA SISGFGTSQG GRELPGYDLV VQAMSGLMSL TGEPDGPALR SGISVFDVMT
GLHTAIAILA ALHHRTLTGE GQHLEASLFA SALSGMVNQT SAYVAGGVVP SRMGNAHPSL
FPYEPFPTAE GELVVTIGND VQFARLCDVL GVPELAQDPR FAHPDDRTAH REQLRPLLEH
QLRHDSADAW FERLTAVGVP CGPINTVAEG VAFAERIGLE PVIVVGEGSR AVRQTRHPVI
YSKTAPRYDL PPPAHDEHGD EIRDWLQRPM EEDR
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