Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_2014 |
Symbol | |
ID | 8324114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 2133070 |
End bp | 2133963 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644953138 |
Product | Integrase catalytic region |
Protein accession | YP_003110588 |
Protein GI | 256372764 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAAC GCCGGGCGTG CCGGGTCGTC GGCCAGCCCC GCTCGACTCA GCGCCTCAAG CCCCCCATCC CCTCCGACGA CGAGCTGGCA CTGCGGGCGT GGCTGCGTGA CTTTGCCCGG CGCCGTCCGC GCTGGGGCTG GCGGCGGGCC GCCGTCGAGG CGAAGAAGGC GGGCTGGCGG GCCAACCACA AGCGCATCCA CCGCCTCTGG ATCGCCGAAG GCCTGCGTGT GCCCTACAGA AAGCGCAAGA AGCCCCTGCG GGGGATCGGC AAGCCCGTCG GGGCGATGTG CCCGATCCGG CCCAACGTGA TCTGGGCCAT GGACTTCCAG TTCGACCAGA CGTCGGACGG GAGGATGCTC AAGTTCTTGA ACTTCTTGAA CGTCGTGGAC GAGTTCACCC GCGAAGCCCT CGCCTGTGAC GTCGAGCGTT CGATCGACGC CGACGGGGTG GTCAGATGCC TGGACCGCCT GGCCGCAGGT CGCAGCGCCC CAGTCTACGT CCGCTTCGAC AACGGCCCGG AGTTCATCGC CCACGCCGTG GCTGACTGGT GCCGGTTCAA CGGTACCGGG ACCGTCTTCA TCGATCCCGG CAGCCCCTGG CAGAACGCCT GGATCGAGAG CTTCAACGGC CGGATGCGCG ACGAGCACCT CAACGGCCAG CAGTTCGACA GCCTCCTCGA AGCCCAGGTC CTAACCGAGG ACTGGAGGAT CGACTACAAC ATGAACAGGC CCCACAGCGC ACACGGCTGG CTCACTCCGG TCGAGTTCGT CGAGGCCTGG CTCCACCGAC AAGCACATCA ACTCGCAAAG CGGGTGGCTC AACTCTTGGG GTCCCCTCAA TCCCGGTCGT CACTCAAGAC CGCGACTACG ACGCCGTTCC GGGCCTCGAG GTGA
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Protein sequence | MTERRACRVV GQPRSTQRLK PPIPSDDELA LRAWLRDFAR RRPRWGWRRA AVEAKKAGWR ANHKRIHRLW IAEGLRVPYR KRKKPLRGIG KPVGAMCPIR PNVIWAMDFQ FDQTSDGRML KFLNFLNVVD EFTREALACD VERSIDADGV VRCLDRLAAG RSAPVYVRFD NGPEFIAHAV ADWCRFNGTG TVFIDPGSPW QNAWIESFNG RMRDEHLNGQ QFDSLLEAQV LTEDWRIDYN MNRPHSAHGW LTPVEFVEAW LHRQAHQLAK RVAQLLGSPQ SRSSLKTATT TPFRASR
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