Gene Afer_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1993 
Symbol 
ID8324093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2106212 
End bp2107651 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content69% 
IMG OID644953119 
Productprotein of unknown function DUF195 
Protein accessionYP_003110569 
Protein GI256372745 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCTG TCCTCGCCTT CTGCGTGGGG CTCCTCCTCG GCGCACTCAC CACGGCACTC 
GTGCTGCTTC GTCGCCTCGG TGACCAACGA GCCGCAGCCG CGGATGCGAC CCGAACCCTC
GAGACCCAGC TCGTCGAAGC GAGGACGAAG CTCGCGCAGC TCGAGCCGCA ACGCCTTGCC
GAGCAGACGA ACCTCGGTCC GCTCCTCGAC CAGGCCCAGC GAAGCGTCGA GGAGACGGTC
AAGCGCGTCG TCGCCGAGCA CCTCGACCAC GGCTCCGAGC AAGCGATCCA GAAGGCCACG
GCGCTCCTCG ACAAGGAGTT CCAGCCGCGG CTCGCGTCGC TCGAGGACGG CCGCAAGCTG
CTCCTCGAGA GCGCCGATAC GCTCCGCAAG CTCGTCGACG AGCAGCTTCG CTCCGCTCGC
GAGCAGATCA CCACGACGCT GCGTGCCAGC GGGAGCGAAG CCGCGACCCA GCTCAGCACG
ACCCTCACGG AGCGGATGGA CCAGCTCAAG CAGCTCGCAG CCTCGATCAG CGAGCAGCTC
GCCAACGACC AGCGCCTCAC CGGGACCGTC GAGGAGAGCC TGCGCAGCTT CGTCGCCGAG
AACCAGGAGC TGCGCACGCG GGTCCACGAG CTCACCCAAG CCCTCCAGCG AAGCCCCAAG
CAGCGCGGCA ACTGGGGTGA GCTCGTGCTC GAGAACCTCC TGGTCGGCGC CGGCCTCACC
CAGCATCGCG ACTTCGACCT CCAGGTCGCC TTTCGTGACG ACGACGGGCG CACGGTGATC
GCCGACGCCA TCATCAACCT GCCCGGCGAA CGCCATCTCG TCATCGACGC CAAGGTCCAG
CTCGTCGACT ACCTCCGCGC GGTCGAGGAC CCGGCGAACG ACACCGCCGC ACGCGCACAC
GCCGAGGCGC TGCGCCGTCA GATCAACGAG CTCGCCGACC ATCGCTACGA CCGCCTCGTC
GACGGCGCCC TGGACGGGAC CTTCCTCTTC GTGCCGATCG AGTCGGCGCT CGCACTCGCA
CTCGAGACCG ACCCGGCGCT CATGGAGCTG GCCATCGGCA AGGGGATCTT CCTCGCGACC
CCGACCACCC TCATCCCAGT CCTGAAGCTG GTCGGATTCC TCTGGCGCGG CGCCGAGCGC
GACAGCCGTG CCGAGGAGGC CGAGCGCCTC GCGAGACGCC TCGCCGACAA GATCGCGAGC
TTCGCCGAGA GCTTCCTCCA GATCGACAAG GGGCTCCAGG TCGCACGGAA CGCCTACGAA
CGGGCCGAGG GTCAACTGCG GAGCGGCCGA GGCAACGCGA TGGCGCTCGC TCGTCGCCTC
GGCGAAGTCT CCGGTCGTAG CGGCAAGGCG CTCCCGGCCC CCCTCGAACC GTTCGACGAC
GCTGGCGACG ACGCCAGTGA CGACGATCTC GCGAGCTCTC TCGAAGAGGG AGGCTCGTGA
 
Protein sequence
MIAVLAFCVG LLLGALTTAL VLLRRLGDQR AAAADATRTL ETQLVEARTK LAQLEPQRLA 
EQTNLGPLLD QAQRSVEETV KRVVAEHLDH GSEQAIQKAT ALLDKEFQPR LASLEDGRKL
LLESADTLRK LVDEQLRSAR EQITTTLRAS GSEAATQLST TLTERMDQLK QLAASISEQL
ANDQRLTGTV EESLRSFVAE NQELRTRVHE LTQALQRSPK QRGNWGELVL ENLLVGAGLT
QHRDFDLQVA FRDDDGRTVI ADAIINLPGE RHLVIDAKVQ LVDYLRAVED PANDTAARAH
AEALRRQINE LADHRYDRLV DGALDGTFLF VPIESALALA LETDPALMEL AIGKGIFLAT
PTTLIPVLKL VGFLWRGAER DSRAEEAERL ARRLADKIAS FAESFLQIDK GLQVARNAYE
RAEGQLRSGR GNAMALARRL GEVSGRSGKA LPAPLEPFDD AGDDASDDDL ASSLEEGGS