| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1990 |
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| Symbol | |
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| ID | 8324090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 2102808 |
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| End bp | 2104004 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953116 |
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| Product | Colicin V production protein |
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| Protein accession | YP_003110566 |
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| Protein GI | 256372742 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.510104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGA GCGTGCTCGG GTTCAACCTC GTCGACCTCG TGATCTTGGT CGTGGTGGGG
TTCTCGGCCG TGCGTGGGCT CCGGGTGGGT GCAACCATCC AGCTCTCCTC GTACATCGGT
TTCTGGCTCG GGCTGCTCGC AGGCGCTGCG ATCGCACCGT ACCTGGCCGA TCTCGCCCCA
CAGGGAGTCC TGCGGACGTT CATCGCCCTC GTGGCGCTCT TCGGCGTCGC ATCCATCACC
TCGGCGGCCG CTCGCGCCCT CGGAACGCGC ATCGTCGGAC ACGTGCGTCG AGCCCATCTC
GCCAGGGTGG ACGCTGGAGC CGGATCGATC GTCTCGGTGA TCGCGACCTT GCTCATCATC
TGGGTCGTGG CCGCACTCGC CTTGAACGCG CCGATCCCGG CGCTCGCCTC CGAAGTCTCG
AGCTCCGAGA TCGTGCGCGC CCTCGACGCC ACGCTCCCTC CTGCGCCCAG CGTCTTCGCT
CGGGTGGACG CCCTCTTCTC CACCGAGGGC TTCCCGACCG TCTTCGCGTC GATCCCGCCA
GCGCTCGCGG GCCCGGTCAG CCTCCCGAGC CAGGCCGAGG TCAACCACGT CGAAGCAGAG
GTCGCTCCGT CGATGGTCAA GGTGGAGGGA CTCGCCTGCG GTGAGATCCA AGAGGGCAGC
GCCTTCTCGG TGGGTCCGGG CTACTTCGTC ACCAACGCCC ACGTCGTCGC CGGCGAGCAG
AGCACGTTCC TCGTGCTGCC CTCTGGATCA CAGATCGCGG CCACCGTCAT CCTCTACGAT
CCTCACCTCG ACATCGCCGT CTTGAAGACG ACCGGCTACG ACGTGCCCGC CCTCCACTTC
GACACGCAGG TCCAAGCGCG CGGTACCCAG GGCGTCGTGC TCGGCTACCC CGAGGGCGGA
CCGCTGACCT ACGGATCCGC CGGGGTGATG GCGAGCTTCA ACGCAGTCGG GCGGGACATC
TACAACCAGG GACTCACGAG CCGCCTCGTG TACGAACTCG ATGCGATCGT ACGGCCAGGC
AACTCCGGAG GACCACTGGT GGGCCTGAAC GGACAGGTCC TCGGCGTGGT CTTCTCCCGA
TCGACCACGA ACCCCTACGT CGGCTTCGCA CTGGCTGCTC CGGCCGTCGC GGCAGAGGTG
CACAGCGCCC TCTCGGGCCC GCAGAACCCG GTGTCCACCG AGGGCTGCGT CCCCTAG
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| Protein sequence | MIASVLGFNL VDLVILVVVG FSAVRGLRVG ATIQLSSYIG FWLGLLAGAA IAPYLADLAP
QGVLRTFIAL VALFGVASIT SAAARALGTR IVGHVRRAHL ARVDAGAGSI VSVIATLLII
WVVAALALNA PIPALASEVS SSEIVRALDA TLPPAPSVFA RVDALFSTEG FPTVFASIPP
ALAGPVSLPS QAEVNHVEAE VAPSMVKVEG LACGEIQEGS AFSVGPGYFV TNAHVVAGEQ
STFLVLPSGS QIAATVILYD PHLDIAVLKT TGYDVPALHF DTQVQARGTQ GVVLGYPEGG
PLTYGSAGVM ASFNAVGRDI YNQGLTSRLV YELDAIVRPG NSGGPLVGLN GQVLGVVFSR
STTNPYVGFA LAAPAVAAEV HSALSGPQNP VSTEGCVP
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