| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1969 |
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| Symbol | |
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| ID | 8324069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 2068560 |
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| End bp | 2070023 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953096 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003110546 |
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| Protein GI | 256372722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0135269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCACGT CCTCCGAGCA CCGCCTCTCC GCCAACGCCA TCGGACGGCG CGAGGTCCTC
TTCCAGAGCG TCACCGCGAT GGCACCCGGC GCCGCCATCG CGGCTTCGAT CCCGGCCGGT
GCAGGCTTCG CTGGGGGAGC GCTTGCCCTC GCGGTCGTCG TGGCGCTGAT CGGAAGCCTG
CTCACTGCCC TCTCGATCGG TGAGCTCGCC TCTCGGTTCC CGTCAGCTGG GTCGTTCGCC
ACCTACGCAT CGAAGGCACT CCACCCCATC GTCGGCTTCT TCGTTGGCTG GTCCTACGTG
TTCGTCTACG CCCTGGTGCC CGCACTCCTG TTTCTGCAGC TCGGCTTCAC GGTCGCGGGG
ACCCTCCACA GCGAGTTCGG CTACCCGGCA TCGCTCTGGT GGCCATGGTC GCTCGCGGGT
ATCGCGCTCG TGGGAACCTT GGCGTTGCTC GGTATCTCGA CATCGGCCAA GGCCGGGACC
ATCCTCGGCG CGATCGAGAT CTCCGTGTTC GTCGTCGCAG CGATCCTGTT CATCATCCAC
GCCGGCTCGC ACAACTCGTT GACGCCGTTC ACGACCCGAG ACACCCCCCA TGCGTTCCCC
GGCCTGACCG GCGTGTTCGC CGGCTCCGTC TACAGCCTCC TCGCCTTCGC GGGCTTCGAG
GCAGCCGCTC CGCTCGCCGA GGAGGCGCGC GATCCGAAGC GCACCGTCCG CTTCGCCATT
CTCGGCTCGA CCCTTATCAT CGGCCTCATC TACGTCTTCA CCACCTACGC CGCCGAGGTC
GCCGCCGGAC CCAGCCACTT CGCGTCCTTT GCCGGGGCTG GCGCCGAGTC GTGGATTGGT
CTCTCGAGGA GCTTCTTCGG TATCTTCTGG GTGCTCGTGT TCCTCGCCAT CTTGAACTCG
ACGATCGGCA ACGCCAATGC GGGTACGTCG GTGTCGACGA GGATGGCCTT TGCGCTCGGA
CGCATTGGGG TGTTCCCCAC CCTGCTCGGA CGGGTTCACG AGAAGACGAA GGTTCCCCAC
GTCGCCGTCT ACTCCCAAAT CATCGTCTCC GCCGTCGCAA CACTCATCCT GGGGCTCGCC
TTCGGACCGG AGAACGGCTT CGCTCTCGAC GGCACGATCA TCACCATCGT CGTCGTCGCG
GTCTACATCG TCATGAACCT CGCTGCACTC GTCTACTTCG CACGTCGCGC AAATGGAGAG
CGCTTCAACC CACTCCTCCA CGGCCTCGCG CCGATCGTCG CCATCGCCTT CCTCCTCCCC
GCGCTCCTCG CCGGGGCCGG CATCGCTGTC TTCTCGTTCA TCTCACCGCT GACCCCACCG
GCGTCCTACG CTGGTCCCAT CGTCGCCGTG TGGCTGGTCG TGGGGATCGT CGTGTTCTTG
AACCTGCGTG CACGTGCGCC ACAGGCCGTC GGACGGATTG CCGAGGTCTA CCTCGACGAC
GTCCTCGATG TCGAGGAGGC ATGA
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| Protein sequence | MSTSSEHRLS ANAIGRREVL FQSVTAMAPG AAIAASIPAG AGFAGGALAL AVVVALIGSL
LTALSIGELA SRFPSAGSFA TYASKALHPI VGFFVGWSYV FVYALVPALL FLQLGFTVAG
TLHSEFGYPA SLWWPWSLAG IALVGTLALL GISTSAKAGT ILGAIEISVF VVAAILFIIH
AGSHNSLTPF TTRDTPHAFP GLTGVFAGSV YSLLAFAGFE AAAPLAEEAR DPKRTVRFAI
LGSTLIIGLI YVFTTYAAEV AAGPSHFASF AGAGAESWIG LSRSFFGIFW VLVFLAILNS
TIGNANAGTS VSTRMAFALG RIGVFPTLLG RVHEKTKVPH VAVYSQIIVS AVATLILGLA
FGPENGFALD GTIITIVVVA VYIVMNLAAL VYFARRANGE RFNPLLHGLA PIVAIAFLLP
ALLAGAGIAV FSFISPLTPP ASYAGPIVAV WLVVGIVVFL NLRARAPQAV GRIAEVYLDD
VLDVEEA
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