| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1964 |
|---|
| Symbol | |
|---|
| ID | 8324064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 2060927 |
|---|
| End bp | 2063413 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644953091 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_003110541 |
|---|
| Protein GI | 256372717 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.281199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCG ATCACTTCAC CCACAAGCTC CAAGAGGCGC TGCAGGATGC GAAGCGCCTC
GCCACCGAGC GCCAGAACCC CGAGGTCACC CCGCAGCACC TCGCGCTCGC CCTGCTCGGC
CAACCCGACG GGATGGCGCT CGCCGTCCTC TCGCGAGCCG GGATCGCTCC CGCCAGCGTG
CGCAACCAGC TCCTCGAGGC CCTCGAGCGC CTACCACGCG CCTACGGCCA AGCGGCCGAA
CCGGCAGGAT CGGCGGCGCT CGCACGGGTG CTCGAGCGCG CCGAGCAGCT GCGCGGTGAG
TACGGCGACG ACTACCTCTC CGTCGAGCAC GTCCTGCTCG CCATGGCGGC CGTGCTCAAG
GTCGACGAGG CGACGCTGCG CCAGGCGATC GACGCCGTGC GTGGCGGACG CCGTGTGACC
TCGGCCGACC CCGAGGACAC CCTAGAAGCG CTCACCAAGT ACGGGCGCGA CCTCACCGAG
GCTGCACGCG CAGGCTCCAT CGACCCCGTG ATCGGCCGTG ACGAAGAGAT CCGTCGGGTC
ATCCAGATCC TCTCGCGTCG GCAGAAGAAC AACCCGGTCC TCATCGGCGA ACCCGGCGTC
GGCAAGACCG CGATCGTCGA GGGGCTCGCA CGCCGGATCG TCGAAGGTGA CGTGCCCGAA
GGCCTGCGCG GCAAGCGGAT CATCGCGCTC GATCTCGGCT CCATGGTCGC AGGAGCGCAG
TACCGCGGTC AGTTCGAGGA ACGCCTCAAG AGCGTGCTCG ACGCCATTCG CCAGAGCGAA
GGCGAGGTCA TCACCTTCAT CGACGAGCTC CACACCGTGG TCGGTGCGGG TGCGGCCGAG
GGATCGCTCG ACGCCTCCAA CATGCTCAAG CCCATGCTCG CGCGCGGCGA GCTGCGCATG
ATCGGCGCGA CCACCCTCGA CGAGTATCGC AAGCACATCG AGTCCGACGC CGCACTCGAG
CGACGCTTCG CCAAGGTCAT GGTCGACCAG CCCAGCGTCG AGGAGACGGT CGCGATCCTG
CGCGGCTTGA AGGAGCGCTA CGAGGTGCAC CACGGCGTGC GGATCCAAGA CGCCGCCCTG
GTCGCTGCCG CGGTCCTGTC GGATCGCTAC ATCACCGATC GCTTCTTGCC CGACAAGGCG
ATCGACCTCG TGGACGAGGC CATGGCCCGA CTGCGCATGG AGATCGACTC GCGACCCGAG
GAGATCGACT CCGTCGAGCG CCGTCTGCGC CAGCTCGAGA TCGAGCGCAT CTCACTCGCG
ACCGAGACCG ACCGCGCCTC ACGCGAGCGC CTCACCCGCC TCGACCAGGA CATCGAGGCC
ACGAAGCTCG AGCTCAGTGA GCTGACCCGC CAGTGGCAAG CCGAACGGGA AGCGATCGAC
GTCATCCGCC AGCGCAAGGA GCACCTCGAG GAGCTGCGTG CCCAGTCGGA AGCCTACGAG
CGCCAAGGCA TGCTGGACCG CGCCGCCGAG CTGCGCTATG GCGAGATCCC TCGCCTCGAG
CGCGAGATCG AGGAGGCGAC CGAAGAACTC TCGAAGCGCC AGGGTGGCCG GCGCATGCTC
AAGGAGGAGG TCGACCCCGA GGACATCGCC GAGGTGGTCG CGGCCGCGAC CGGCATCCCG
GTGACCAAGC TCCTCGAGAG CGAGACCGAG AAGCTGCTCC ACATCGAAGA CGCACTGCGT
GCGCGGGTGG TGGGTCAAGA CGAGGCGATC GACGCGGTGG CGAACGCCAT CCGGCGCAGC
CGTGCCGGCA TCGCCGATCG GAACCGCCCC ATCGGCTCCT TCCTCTTCCT CGGCCCGACG
GGCGTCGGCA AGACCGAGAC CGCCAAGGCG CTCGCGGAGT ACCTCTTCGA CGACGAGCGA
GCCATGATCC GCATCGACAT GAGCGAGTAC CAGGAGCGTC ACAGCGTCTC GCGCCTCGTC
GGTGCGCCCC CTGGCTACGT CGGCTACGAC GAGGGCGGAC AGCTCACCGA GGCGGTGCGG
CGCCGTCCCT ACGCGGTGGT CCTCTTCGAC GAGATCGAGA AGGCGCACGC CGACGTGTTC
AACGTGTTCC TCCAGATCCT CGACGACGGC CGCCTCACCG ACGGTCAGGG GCGGGTGGTG
AACTTCACGA ACACCATCCT CATCATGACC TCGAACCTCG CCGACGATCC GCGGCGCTTC
TTCAAGCCCG AGTTCGTGAA CCGCATCGAC GAGATCGTGC GCTTCCACGA GCTCACCTCG
GACCAGATCC GCGCCATCGT CGACCGCCAG ATGGCCCAAC TCGCCGGTCG GCTCGCCGAG
CGCTCACTCG GTCTCGAGGT CACCGACGCC GCGGCGGCCC TGCTGGCCGA GCGCGGCTGG
GATCCGGCCT TCGGTGCTCG ACCCCTGCGT CGAGCCATCC AACGCCTCGT CGGCGACCCG
CTGGCCAGAG CGCTTCTCGA AGGGCGCTAC GGCGAGGGAG ACACGGTCGT GGTCGACGCG
GCCGACGGCG CCATCGTGCT GCGCTGA
|
|---|
| Protein sequence | MRTDHFTHKL QEALQDAKRL ATERQNPEVT PQHLALALLG QPDGMALAVL SRAGIAPASV
RNQLLEALER LPRAYGQAAE PAGSAALARV LERAEQLRGE YGDDYLSVEH VLLAMAAVLK
VDEATLRQAI DAVRGGRRVT SADPEDTLEA LTKYGRDLTE AARAGSIDPV IGRDEEIRRV
IQILSRRQKN NPVLIGEPGV GKTAIVEGLA RRIVEGDVPE GLRGKRIIAL DLGSMVAGAQ
YRGQFEERLK SVLDAIRQSE GEVITFIDEL HTVVGAGAAE GSLDASNMLK PMLARGELRM
IGATTLDEYR KHIESDAALE RRFAKVMVDQ PSVEETVAIL RGLKERYEVH HGVRIQDAAL
VAAAVLSDRY ITDRFLPDKA IDLVDEAMAR LRMEIDSRPE EIDSVERRLR QLEIERISLA
TETDRASRER LTRLDQDIEA TKLELSELTR QWQAEREAID VIRQRKEHLE ELRAQSEAYE
RQGMLDRAAE LRYGEIPRLE REIEEATEEL SKRQGGRRML KEEVDPEDIA EVVAAATGIP
VTKLLESETE KLLHIEDALR ARVVGQDEAI DAVANAIRRS RAGIADRNRP IGSFLFLGPT
GVGKTETAKA LAEYLFDDER AMIRIDMSEY QERHSVSRLV GAPPGYVGYD EGGQLTEAVR
RRPYAVVLFD EIEKAHADVF NVFLQILDDG RLTDGQGRVV NFTNTILIMT SNLADDPRRF
FKPEFVNRID EIVRFHELTS DQIRAIVDRQ MAQLAGRLAE RSLGLEVTDA AAALLAERGW
DPAFGARPLR RAIQRLVGDP LARALLEGRY GEGDTVVVDA ADGAIVLR
|
|---|
| |