| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1962 |
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| Symbol | |
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| ID | 8324062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 2059315 |
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| End bp | 2060400 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953089 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_003110539 |
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| Protein GI | 256372715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.236014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCCCCGG CGAGAGAGTG GTTCGAGAAG GACTACTACA AGATCCTCGG CGTTCCCGAG
ACGGCGAGCG AGAAGGACAT CCAGCGTGCG TATCGCAAGT TGGCCCGCCA GTACCACCCC
GATGCGAACC CCGGGCACGA GGAGCGCTTC AAGGAGGTCT CCGCGGCCTA CGACGTCCTC
GGCGATCCCG CCAAGCGCAA GGAGTACGAC GAGGTGCGGC GCCTCGGTCC GCTCGGATCC
ATGGGCGCCC CCACCGGCAA CGGCACCCGT GGCGCCGGGA CGTTCCATGC TGAGGACCTC
GGCGATCTGA TCGGCTCGCT GTTCAATCGG GGCCGTCGCG AGGCCAGCGG GCCTCGACGC
GGCGCCGACC AAGAGGCCGA GGTCACCATC TCGTTCGAGG ACGCAGCTCG TGGCGCCGAG
GTGCAGATCC CCGTCACCGG TGAGGCGGCG TGCTCGGTGT GCAAGGGTAC GGGTGCAGCC
CCCGGCACCG TGCCGAAGAC CTGCGCCCGC TGCAATGGGA CCGGGACGGT CTCGGACAAC
CAGGGGTTCT TCTCCTTCTC GCAGCCCTGT CCTGCGTGCC ACGGCCGCGG CCTCATCATC
GAGCAGCCCT GTCCCTCGTG CCACGGCACC GGCACCGAGC ACCGAACCCG CATCGTGAAG
GCGAGGATCC CCGCGGGTGT CGAGCCCGAC TCGACCATCC GCCTGCGCGG CCGTGGCGCG
CCGGGGCGCA ACGGGGCTCC TGCGGGCGAC CTCTTCGTGC GGGTGCACGT GCTGCCGCAT
CCGATGTTCG GTCGACGCGG AGCGGATCTC ACGTTGCGTC GCACGATCAG CTTCGCCGAC
GCCGCCCTCG GCACCGTCCT CACCGTGCCC ACCCTCGACG GCACGGTCTC GGTGAAGGTT
CCGCCTGGCA CGAGCGCCGG CACGGTGCTG CGGGTCCGCG GCAAGGGGCT CCCCAACCCC
AAGCGCAAGG GAGCCCGCGG CGACCTTCTG GTCACGATCG ACATCGACGT GCCGGACAAG
CTCGATGCCA AGCAGCGGCG CTACCTCGAG GACTTCGCTC GCGTCTTCCC CCACGACGCA
GCCTGA
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| Protein sequence | MAPAREWFEK DYYKILGVPE TASEKDIQRA YRKLARQYHP DANPGHEERF KEVSAAYDVL
GDPAKRKEYD EVRRLGPLGS MGAPTGNGTR GAGTFHAEDL GDLIGSLFNR GRREASGPRR
GADQEAEVTI SFEDAARGAE VQIPVTGEAA CSVCKGTGAA PGTVPKTCAR CNGTGTVSDN
QGFFSFSQPC PACHGRGLII EQPCPSCHGT GTEHRTRIVK ARIPAGVEPD STIRLRGRGA
PGRNGAPAGD LFVRVHVLPH PMFGRRGADL TLRRTISFAD AALGTVLTVP TLDGTVSVKV
PPGTSAGTVL RVRGKGLPNP KRKGARGDLL VTIDIDVPDK LDAKQRRYLE DFARVFPHDA
A
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